RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 HDAC9Q9UKV0 1011 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 DENND2AQ9ULE3 1009 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 EXOC6BQ9Y2D4 811 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 SUGT1Q9Y2Z0 365 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 SUPT16HQ9Y5B9 1047 aaKnown RBP4.88□□□□□ -1.63
CNOT4-202ENST00000356162 UQCRFS1P1P0C7P4 283 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 EPS15P42566 896 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 PHKA1P46020 1223 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 CHAF1AQ13111 956 aaPredicted RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 CCDC102BQ68D86 513 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 GPIHBP1Q8IV16 184 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 WDR66Q8TBY9 1149 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 RHPN1Q8TCX5 695 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 TRPM4Q8TD43 1214 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 IL21Q9HBE4 155 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 IGSF3O75054 1194 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 FRAT2O75474 233 aaPredicted RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 USP17L8P0C7I0 530 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 HDAC1Q13547 482 aaPredicted RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 EAPPQ56P03 285 aaPredicted RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 MFSD14BQ5SR56 506 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 ZGPATQ8N5A5 531 aaKnown RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 CERS5Q8N5B7 392 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 MTMR14Q8NCE2 650 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 ZC3H15Q8WU90 426 aaKnown RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 ZNF512BQ96KM6 892 aaPredicted RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 PCDHB15Q9Y5E8 787 aa4.87□□□□□ -1.63
CNOT4-202ENST00000356162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.87□□□□□ -1.63
CNOT4-202ENST00000356162 PITPNM2Q9BZ72 1349 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 MYH7P12883 1935 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 SHTN1A0MZ66 631 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 TTC39AQ5SRH9 613 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 GORABQ5T7V8 394 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 AACSQ86V21 672 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 CLASRPQ8N2M8 674 aaKnown RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 EXOC6Q8TAG9 804 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 ZBED3Q96IU2 234 aaPredicted RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 NEUROD6Q96NK8 337 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 DBNDD2Q9BQY9 259 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 MXD3Q9BW11 206 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 LRRCC1Q9C099 1032 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 DCTPP1Q9H773 170 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 MYOZ2Q9NPC6 264 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 PGAP2Q9UHJ9 254 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 MYH2Q9UKX2 1941 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 PAPPA2Q9BXP8 1791 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 CENPBP07199 599 aaPredicted RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 C1QTNF8P60827 252 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 TIMM10P62072 90 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 HDLBPQ00341 1268 aaKnown RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 RASGRF1Q13972 1273 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 TBC1D10BQ4KMP7 808 aaPredicted RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 CCDC158Q5M9N0 1113 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 KIAA0825Q8IV33 1275 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 OGFOD1Q8N543 542 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 EAF2Q96CJ1 260 aaPredicted RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 GCC1Q96CN9 775 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 PRR14Q9BWN1 585 aa4.86□□□□□ -1.63
CNOT4-202ENST00000356162 DBNLQ9UJU6 430 aaKnown RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 IQSEC3Q9UPP2 1182 aaPredicted RBP4.86□□□□□ -1.63
CNOT4-202ENST00000356162 IFIT2P09913 472 aaKnown RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 SPTY2D1Q68D10 685 aaPredicted RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 APOBEC3FQ8IUX4 373 aaKnown RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 ZNF516Q92618 1163 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 IL1RAPL2Q9NP60 686 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 TLR7Q9NYK1 1049 aaKnown RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 GGA3Q9NZ52 723 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 SERPINA10Q9UK55 444 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 TTF2Q9UNY4 1162 aaKnown RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 JAG2Q9Y219 1238 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 PASKQ96RG2 1323 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 FOCADQ5VW36 1801 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 THSD7BQ9C0I4 1608 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 MYO5AQ9Y4I1 1855 aaKnown RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 LDHBP07195 334 aaKnown RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 MCAMP43121 646 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 HIRAP54198 1017 aaPredicted RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 DLGAP5Q15398 846 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 CFAP100Q494V2 611 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 SPATA5Q8NB90 893 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 TEKT1Q969V4 418 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 MRIQ9BWK5 157 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 CCDC8Q9H0W5 538 aaPredicted RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 RWDD1Q9H446 243 aaPredicted RBP4.85□□□□□ -1.63
CNOT4-202ENST00000356162 HMG20BQ9P0W2 317 aa4.85□□□□□ -1.63
CNOT4-202ENST00000356162 RPAP1Q9BWH6 1393 aaPredicted RBP4.84□□□□□ -1.63
CNOT4-202ENST00000356162 F8W031 263 aaPredicted RBP4.84□□□□□ -1.63
CNOT4-202ENST00000356162 APBB1O00213 710 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 EGFRP00533 1210 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 SLC10A3P09131 477 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 CRKP46108 304 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 SCARF1Q14162 830 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 TMED8Q6PL24 325 aaPredicted RBP4.84□□□□□ -1.63
CNOT4-202ENST00000356162 HHIPL2Q6UWX4 724 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 DCPSQ96C86 337 aaKnown RBP4.84□□□□□ -1.63
CNOT4-202ENST00000356162 GPATCH3Q96I76 525 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 PPP2R3BQ9Y5P8 575 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 CDK5RAP2Q96SN8 1893 aa4.84□□□□□ -1.63
CNOT4-202ENST00000356162 GAKO14976 1311 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms