RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PFKFB2O60825 505 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 OAS2P29728 719 aaKnown RBP15.99■□□□□ 0.15
SREBF1-202ENST00000355815 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 NAA16Q6N069 864 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-202ENST00000355815 CLEC17AQ6ZS10 378 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-202ENST00000355815 CDC5LQ99459 802 aaKnown RBP15.99■□□□□ 0.15
SREBF1-202ENST00000355815 DSCC1Q9BVC3 393 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 SH3TC1Q8TE82 1336 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 GYG1P46976 350 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 PIGBQ92521 554 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 IFIT1BQ5T764 474 aaKnown RBP15.99■□□□□ 0.15
SREBF1-202ENST00000355815 WWC3Q9ULE0 1092 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 F8W031 263 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-202ENST00000355815 STIM1Q13586 685 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 TRMT44Q8IYL2 757 aaKnown RBP15.99■□□□□ 0.15
SREBF1-202ENST00000355815 GOLGA1Q92805 767 aa15.99■□□□□ 0.15
SREBF1-202ENST00000355815 NF2P35240 595 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 MYSM1Q5VVJ2 828 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 IQCEQ6IPM2 695 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 GPIHBP1Q8IV16 184 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 DIS3L2Q8IYB7 885 aaKnown RBP15.98■□□□□ 0.15
SREBF1-202ENST00000355815 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
SREBF1-202ENST00000355815 ANKRD62A6NC57 917 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 ANKRD65E5RJM6 399 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 N4BP3O15049 544 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 PDE6AP16499 860 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 SPA17Q15506 151 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 ZNF174Q15697 407 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 ZNF569Q5MCW4 686 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 SEPT11Q9NVA2 429 aaKnown RBP15.98■□□□□ 0.15
SREBF1-202ENST00000355815 V9GY48 417 aaPredicted RBP15.98■□□□□ 0.15
SREBF1-202ENST00000355815 SALL3Q9BXA9 1300 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 CAVIN2O95810 425 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 UIMC1Q96RL1 719 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 NRKQ7Z2Y5 1582 aa15.98■□□□□ 0.15
SREBF1-202ENST00000355815 BTBD18B2RXH4 712 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 PDE8AO60658 829 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 PAFAH1B1P43034 410 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 GOLGA8FQ08AF8 430 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 GOLGA8DPQ0D2H9 430 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 PNOCQ13519 176 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 NPHP4O75161 1426 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-202ENST00000355815 ERVV-2B6SEH9 535 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
SREBF1-202ENST00000355815 COBLO75128 1261 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 CDK5RAP3Q96JB5 506 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 IFFO1Q0D2I5 559 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 SPATA5Q8NB90 893 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 ESR2Q92731 530 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 SCLT1Q96NL6 688 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 RPAP1Q9BWH6 1393 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-202ENST00000355815 MAGEB6P1A0A0J9YX57 407 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 H7C1W4 665 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 ERLIN2O94905 339 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 CTSWP56202 376 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 TDRD12Q587J7 1177 aaKnown RBP15.97■□□□□ 0.15
SREBF1-202ENST00000355815 OTUD6BQ8N6M0 293 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-202ENST00000355815 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
SREBF1-202ENST00000355815 GOPCQ9HD26 462 aa15.97■□□□□ 0.15
SREBF1-202ENST00000355815 PUM3Q15397 648 aaKnown RBP15.96■□□□□ 0.15
SREBF1-202ENST00000355815 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
SREBF1-202ENST00000355815 C6orf229H3BNL8 230 aa15.96■□□□□ 0.15
SREBF1-202ENST00000355815 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■■□□□ 12.3
SREBF1-202ENST00000355815 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-202ENST00000355815 EEF2KMTQ96G04 330 aa15.96■□□□□ 0.15
SREBF1-202ENST00000355815 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
SREBF1-202ENST00000355815 NCOA3Q9Y6Q9 1424 aa15.96■□□□□ 0.15
SREBF1-202ENST00000355815 ZNF444Q8N0Y2 327 aaPredicted RBP15.96■□□□□ 0.14
SREBF1-202ENST00000355815 CACTINQ8WUQ7 758 aaKnown RBP15.96■□□□□ 0.14
SREBF1-202ENST00000355815 TAF4BQ92750 862 aa15.96■□□□□ 0.14
SREBF1-202ENST00000355815 VPS54Q9P1Q0 977 aa15.96■□□□□ 0.14
SREBF1-202ENST00000355815 GUCA1BQ9UMX6 200 aa15.96■□□□□ 0.14
SREBF1-202ENST00000355815 ZSCAN29Q8IWY8 852 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-202ENST00000355815 KRT23Q9C075 422 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 MCM9Q9NXL9 1143 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 MYO1BO43795 1136 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 HINFPQ9BQA5 517 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 WDHD1O75717 1129 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-202ENST00000355815 KRT18P05783 430 aaKnown RBP15.95■□□□□ 0.14
SREBF1-202ENST00000355815 ERCC3P19447 782 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 MCM7P33993 719 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 DPCR1Q3MIW9 517 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 CCDC178Q5BJE1 867 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 FAM47AQ5JRC9 791 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 FBXO18Q8NFZ0 1043 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 AATFQ9NY61 560 aaKnown RBP eCLIP15.95■□□□□ 0.141e-7■□□□□ 8.1
SREBF1-202ENST00000355815 DLC1Q96QB1 1528 aa15.95■□□□□ 0.14
SREBF1-202ENST00000355815 VWA3AA6NCI4 1184 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 RESTQ13127 1097 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 TRMT1LQ7Z2T5 733 aaKnown RBP15.94■□□□□ 0.14
SREBF1-202ENST00000355815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.14
SREBF1-202ENST00000355815 KCNH3Q9ULD8 1083 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 CYP2D7A0A087X1C5 515 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 PFKFB1P16118 471 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 GBP6Q6ZN66 633 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms