RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 MAGI2Q86UL8 1455 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 IQGAP3Q86VI3 1631 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 XRCC5P13010 732 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 GNA15P30679 374 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 CABP4P57796 275 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 DUSP9Q99956 384 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 NRSN2Q9GZP1 204 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 C12orf49Q9H741 205 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 LAS1LQ9Y4W2 734 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 CD109Q6YHK3 1445 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 ERBINQ96RT1 1412 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 DENND4BO75064 1496 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 ADGRL1O94910 1474 aa9.98□□□□□ -0.81
UBE2D3-204ENST00000349311 ATP7AQ04656 1500 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 CHRNA4P43681 627 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 DAB2P98082 770 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 CYB5RLQ6IPT4 315 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 CD163Q86VB7 1156 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 DCAF11Q8TEB1 546 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 MRS2Q9HD23 443 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 RRP7BPQ9NSQ0 103 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 SPG7Q9UQ90 795 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 AK5Q9Y6K8 562 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 KIF15Q9NS87 1388 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 ZNF518AQ6AHZ1 1483 aa9.97□□□□□ -0.81
UBE2D3-204ENST00000349311 ADAM11O75078 769 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 B3GALT4O96024 378 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 HNRNPMP52272 730 aaKnown RBP eCLIP9.96□□□□□ -0.824e-13■■■■■ 32.7
UBE2D3-204ENST00000349311 PCDH1Q08174 1060 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 IKBKEQ14164 716 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 ADGRE1Q14246 886 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 PLA2G4EQ3MJ16 856 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 FAM117BQ6P1L5 589 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 SHISA2Q6UWI4 295 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 TMEM130Q8N3G9 435 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 ZFYVE1Q9HBF4 777 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 SEC31BQ9NQW1 1179 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 KCNK4Q9NYG8 393 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 PARP2Q9UGN5 583 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 TRAPPC8Q9Y2L5 1435 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 PZPP20742 1482 aa9.96□□□□□ -0.82
UBE2D3-204ENST00000349311 C1QTNF9BB2RNN3 333 aa9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 C9orf172C9J069 976 aa9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 FAAP100Q0VG06 881 aa9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 SUZ12Q15022 739 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 TMC4Q7Z404 712 aa9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 RGS22Q8NE09 1264 aa9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 NACC1Q96RE7 527 aa9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 PRKRIP1Q9H875 184 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 HECW2Q9P2P5 1572 aa9.95□□□□□ -0.82
UBE2D3-204ENST00000349311 VIRMAQ69YN4 1812 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 MLH3Q9UHC1 1453 aa9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 CD68P34810 354 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 FCGRTP55899 365 aa9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 C19orf57Q0VDD7 668 aa9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 NPM2Q86SE8 214 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 FAM9BQ8IZU0 186 aa9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 FAM8A1Q9UBU6 413 aa9.94□□□□□ -0.82
UBE2D3-204ENST00000349311 TSPOAP1O95153 1857 aa9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 RNF17Q9BXT8 1623 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 CCDC7Q96M83 1385 aa9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 HSPA5P11021 654 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 CDC25BP30305 580 aa9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 GSTT1P30711 240 aa9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 CARD10Q9BWT7 1032 aa9.93□□□□□ -0.82
UBE2D3-204ENST00000349311 ZMYM4Q5VZL5 1548 aa9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 SCAPERQ9BY12 1400 aa9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 NRG1Q02297 640 aaPredicted RBP9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 DTHD1Q6ZMT9 781 aa9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 BCL2L13Q9BXK5 485 aa9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 PPM1HQ9ULR3 514 aa9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
UBE2D3-204ENST00000349311 TEX14Q8IWB6 1497 aa9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 TET3O43151 1660 aa9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 RBM47A0AV96 593 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 APBA3O96018 575 aa9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 NFKBIBQ15653 356 aa9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 Q6ZS46 218 aa9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 FRAT1Q92837 279 aaPredicted RBP9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 TRIM56Q9BRZ2 755 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 FAM135AQ9P2D6 1515 aa9.91□□□□□ -0.82
UBE2D3-204ENST00000349311 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 FRMPD1Q5SYB0 1578 aa9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 WISP1O95388 367 aa9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 PROCP04070 461 aa9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 ZNF16P17020 682 aaPredicted RBP9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 ARL4DP49703 201 aa9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 MPHOSPH9Q99550 1183 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms