RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SCRN1Q12765 414 aa25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 CERS5Q8N5B7 392 aa25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 MTA3Q9BTC8 594 aa25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 GPHNQ9NQX3 736 aaPredicted RBP25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 TOMM22Q9NS69 142 aa25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 ZSWIM5Q9P217 1185 aa25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 CDK5RAP2Q96SN8 1893 aa25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 SLC3A2P08195 630 aaKnown RBP25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 RRP12Q5JTH9 1297 aaKnown RBP25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 STRIP1Q5VSL9 837 aa25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 NAP1L2Q9ULW6 460 aaPredicted RBP25.26■■□□□ 1.63
TSPAN3-202ENST00000346495 AOC3Q16853 763 aa25.25■■□□□ 1.63
TSPAN3-202ENST00000346495 SOGA3Q5TF21 947 aa25.25■■□□□ 1.63
TSPAN3-202ENST00000346495 NKX2-3Q8TAU0 364 aa25.25■■□□□ 1.63
TSPAN3-202ENST00000346495 PSMD1Q99460 953 aa25.25■■□□□ 1.63
TSPAN3-202ENST00000346495 MKRN1Q9UHC7 482 aaKnown RBP25.25■■□□□ 1.63
TSPAN3-202ENST00000346495 ZNF646O15015 1829 aaPredicted RBP25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 CYP2D7A0A087X1C5 515 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 KLF18A0A0U1RQI7 1052 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 DDX11L8A8MPP1 907 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 FGRP09769 529 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 IGDCC4Q8TDY8 1250 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 ESR2Q92731 530 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 MCM9Q9NXL9 1143 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 PIM2Q9P1W9 311 aa25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 TTF2Q9UNY4 1162 aaKnown RBP25.24■■□□□ 1.63
TSPAN3-202ENST00000346495 PPIP5K2O43314 1243 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 PDCP20941 246 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 SYT1P21579 422 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 SART3Q15020 963 aaKnown RBP25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 TMEM67Q5HYA8 995 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 AMOTL1Q8IY63 956 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 STK11IPQ8N1F8 1099 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 BRPF3Q9ULD4 1205 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 DAGLAQ9Y4D2 1042 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 IFIT3O14879 490 aaKnown RBP25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 STX6O43752 255 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 BAG4O95429 457 aaKnown RBP25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 LIFRP42702 1097 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 TEX11Q8IYF3 940 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 TGFBRAP1Q8WUH2 860 aa25.23■■□□□ 1.63
TSPAN3-202ENST00000346495 SCN9AQ15858 1988 aa25.22■■□□□ 1.63
TSPAN3-202ENST00000346495 FOCADQ5VW36 1801 aa25.22■■□□□ 1.63
TSPAN3-202ENST00000346495 USP17L3A6NCW0 530 aa25.22■■□□□ 1.63
TSPAN3-202ENST00000346495 USP17L4A6NCW7 530 aa25.22■■□□□ 1.63
TSPAN3-202ENST00000346495 USP17L1Q7RTZ2 530 aa25.22■■□□□ 1.63
TSPAN3-202ENST00000346495 SGMS1Q86VZ5 419 aa25.22■■□□□ 1.63
TSPAN3-202ENST00000346495 GOLGA8BA8MQT2 603 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 F8W031 263 aaPredicted RBP25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 ORC4O43929 436 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 RHBDL3P58872 404 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 CCT2P78371 535 aaKnown RBP25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 DACT2Q5SW24 774 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 SMARCC2Q8TAQ2 1214 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 MXD3Q9BW11 206 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 VPS33BQ9H267 617 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 LY9Q9HBG7 655 aa25.21■■□□□ 1.63
TSPAN3-202ENST00000346495 BRCA1P38398 1863 aaKnown RBP25.2■■□□□ 1.63
TSPAN3-202ENST00000346495 ERICH2A1L162 156 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 DHX16O60231 1041 aaKnown RBP25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 USP17L8P0C7I0 530 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 PTMSP20962 102 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 NT5C2P49902 561 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 HMGN5P82970 282 aaKnown RBP25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 C12orf60Q5U649 245 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 HHIPL2Q6UWX4 724 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 KCNQ5Q9NR82 932 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 PSME4Q14997 1843 aa25.2■■□□□ 1.62
TSPAN3-202ENST00000346495 GOLGA6L22H0YM25 854 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 SMIM22K7EJ46 135 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 ZSCAN22P10073 491 aaPredicted RBP25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 CYP2D6P10635 497 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 PDE4BQ07343 736 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 FOXD4L5Q5VV16 416 aaPredicted RBP25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 LARP1BQ659C4 914 aaKnown RBP25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 NFXL1Q6ZNB6 911 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 TMTC2Q8N394 836 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 NSUN7Q8NE18 718 aaKnown RBP25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 FOXD4L4Q8WXT5 416 aaPredicted RBP25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 TEKT1Q969V4 418 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 SGIP1Q9BQI5 828 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 MRIQ9BWK5 157 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 DDX60LQ5H9U9 1706 aaKnown RBP25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 JAK2O60674 1132 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 MAPKAPK5Q8IW41 473 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 UBAC1Q9BSL1 405 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 NCOA5Q9HCD5 579 aaKnown RBP25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 HPS5Q9UPZ3 1129 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 CD2APQ9Y5K6 639 aa25.19■■□□□ 1.62
TSPAN3-202ENST00000346495 ROBO3Q96MS0 1386 aa25.18■■□□□ 1.62
TSPAN3-202ENST00000346495 WTAPQ15007 396 aa25.18■■□□□ 1.62
TSPAN3-202ENST00000346495 DALRD3Q5D0E6 543 aaKnown RBP25.18■■□□□ 1.62
TSPAN3-202ENST00000346495 KIF3AQ9Y496 699 aa25.18■■□□□ 1.62
TSPAN3-202ENST00000346495 MYH1P12882 1939 aa25.17■■□□□ 1.62
TSPAN3-202ENST00000346495 CCDC69A6NI79 296 aa25.17■■□□□ 1.62
TSPAN3-202ENST00000346495 CTDNEP1O95476 244 aa25.17■■□□□ 1.62
TSPAN3-202ENST00000346495 HDLBPQ00341 1268 aaKnown RBP25.17■■□□□ 1.62
TSPAN3-202ENST00000346495 APOA5Q6Q788 366 aa25.17■■□□□ 1.62
TSPAN3-202ENST00000346495 FLT1P17948 1338 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms