RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ELP3Q9H9T3 547 aa16.75■□□□□ 0.27
TPM4-202ENST00000344824 PIH1D3Q9NQM4 214 aaKnown RBP16.75■□□□□ 0.27
TPM4-202ENST00000344824 MYH1P12882 1939 aa16.74■□□□□ 0.27
TPM4-202ENST00000344824 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
TPM4-202ENST00000344824 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
TPM4-202ENST00000344824 MIGA2Q7L4E1 593 aa16.74■□□□□ 0.27
TPM4-202ENST00000344824 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
TPM4-202ENST00000344824 HOOK2Q96ED9 719 aa16.74■□□□□ 0.27
TPM4-202ENST00000344824 ZNF512BQ96KM6 892 aaPredicted RBP16.74■□□□□ 0.27
TPM4-202ENST00000344824 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
TPM4-202ENST00000344824 ATAD5Q96QE3 1844 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 LDLRAD1Q5T700 205 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 DCAF15Q66K64 600 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 WNK4Q96J92 1243 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 WRNIP1Q96S55 665 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 AATFQ9NY61 560 aaKnown RBP eCLIP16.73■□□□□ 0.27
TPM4-202ENST00000344824 CSADQ9Y600 493 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 RFX7Q2KHR2 1363 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
TPM4-202ENST00000344824 TRPA1O75762 1119 aa16.72■□□□□ 0.27
TPM4-202ENST00000344824 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
TPM4-202ENST00000344824 TSHZ3Q63HK5 1081 aa16.72■□□□□ 0.27
TPM4-202ENST00000344824 TEX11Q8IYF3 940 aa16.72■□□□□ 0.27
TPM4-202ENST00000344824 CSRNP1Q96S65 589 aa16.72■□□□□ 0.27
TPM4-202ENST00000344824 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
TPM4-202ENST00000344824 DDX4Q9NQI0 724 aaKnown RBP16.72■□□□□ 0.27
TPM4-202ENST00000344824 GPR75-ASB3A0A0A6YYF3 556 aa16.71■□□□□ 0.27
TPM4-202ENST00000344824 CA12O43570 354 aa16.71■□□□□ 0.27
TPM4-202ENST00000344824 CYP7A1P22680 504 aa16.71■□□□□ 0.27
TPM4-202ENST00000344824 VGLL4Q14135 290 aa16.71■□□□□ 0.27
TPM4-202ENST00000344824 PLEKHM2Q8IWE5 1019 aa16.71■□□□□ 0.27
TPM4-202ENST00000344824 ZFPM1Q8IX07 1006 aa16.71■□□□□ 0.27
TPM4-202ENST00000344824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.273e-6■□□□□ 10.7
TPM4-202ENST00000344824 FAM163AQ96GL9 167 aaPredicted RBP16.71■□□□□ 0.27
TPM4-202ENST00000344824 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
TPM4-202ENST00000344824 GOLIM4O00461 696 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
TPM4-202ENST00000344824 BAG3O95817 575 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 RHBDL3P58872 404 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 SREBF2Q12772 1141 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 ADGRA1Q86SQ6 560 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 MAGEB6Q8N7X4 407 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
TPM4-202ENST00000344824 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 ENTPD3O75355 529 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 MX1P20591 662 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.7■□□□□ 0.26
TPM4-202ENST00000344824 TNS4Q8IZW8 715 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 MIGA1Q8NAN2 632 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
TPM4-202ENST00000344824 OTUD5Q96G74 571 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 BOLA2Q9H3K6 86 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 RNF186Q9NXI6 227 aa16.7■□□□□ 0.26
TPM4-202ENST00000344824 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
TPM4-202ENST00000344824 ZBTB48P10074 688 aaPredicted RBP16.69■□□□□ 0.26
TPM4-202ENST00000344824 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
TPM4-202ENST00000344824 EDC3Q96F86 508 aaKnown RBP16.69■□□□□ 0.26
TPM4-202ENST00000344824 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
TPM4-202ENST00000344824 PLCG2P16885 1265 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 INPP5BP32019 993 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 GJA5P36382 358 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 PDE1AP54750 535 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
TPM4-202ENST00000344824 MAPKAPK5Q8IW41 473 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 REM2Q8IYK8 340 aaPredicted RBP16.68■□□□□ 0.26
TPM4-202ENST00000344824 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 SNCAIPQ9Y6H5 919 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 SALL3Q9BXA9 1300 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 MYH8P13535 1937 aa16.68■□□□□ 0.26
TPM4-202ENST00000344824 MANSC4A6NHS7 340 aaPredicted RBP16.67■□□□□ 0.26
TPM4-202ENST00000344824 UNCXA6NJT0 531 aa16.67■□□□□ 0.26
TPM4-202ENST00000344824 SLC4A8Q2Y0W8 1093 aa16.67■□□□□ 0.26
TPM4-202ENST00000344824 SH3BP5LQ7L8J4 393 aa16.67■□□□□ 0.26
TPM4-202ENST00000344824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.67■□□□□ 0.26
TPM4-202ENST00000344824 TGFBRAP1Q8WUH2 860 aa16.67■□□□□ 0.26
TPM4-202ENST00000344824 OSBPL5Q9H0X9 879 aaPredicted RBP16.67■□□□□ 0.26
TPM4-202ENST00000344824 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
TPM4-202ENST00000344824 SAGE1Q9NXZ1 904 aa16.67■□□□□ 0.26
TPM4-202ENST00000344824 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
TPM4-202ENST00000344824 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
TPM4-202ENST00000344824 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
TPM4-202ENST00000344824 PTPRFP10586 1907 aa16.65■□□□□ 0.26
TPM4-202ENST00000344824 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
TPM4-202ENST00000344824 USP5P45974 858 aa16.65■□□□□ 0.26
TPM4-202ENST00000344824 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
TPM4-202ENST00000344824 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
TPM4-202ENST00000344824 PHIPQ8WWQ0 1821 aa16.65■□□□□ 0.26
TPM4-202ENST00000344824 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.25
TPM4-202ENST00000344824 FLT1P17948 1338 aa16.64■□□□□ 0.25
TPM4-202ENST00000344824 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
TPM4-202ENST00000344824 PDE6AP16499 860 aa16.64■□□□□ 0.25
TPM4-202ENST00000344824 ATP5JP18859 108 aa16.64■□□□□ 0.25
TPM4-202ENST00000344824 TTC22Q5TAA0 569 aa16.64■□□□□ 0.25
TPM4-202ENST00000344824 STAP2Q9UGK3 403 aa16.64■□□□□ 0.25
TPM4-202ENST00000344824 SAP30BPQ9UHR5 308 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms