RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MYO5AQ9Y4I1 1855 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-202ENST00000344114 EYA2O00167 538 aa16.27■□□□□ 0.2
HERPUD1-202ENST00000344114 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
HERPUD1-202ENST00000344114 TNNI3KQ59H18 835 aa16.27■□□□□ 0.2
HERPUD1-202ENST00000344114 TMEM39BQ9GZU3 492 aa16.27■□□□□ 0.2
HERPUD1-202ENST00000344114 FPGT-TNNI3KV9GXZ4 949 aa16.27■□□□□ 0.2
HERPUD1-202ENST00000344114 SPDYE5A6NIY4 337 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 CHMLP26374 656 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 CRKP46108 304 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 TNNI2P48788 182 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 TFCP2Q12800 502 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 SLC4A8Q2Y0W8 1093 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 FAM84BQ96KN1 310 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 TLR2O60603 784 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 HIBADHP31937 336 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 GYG1P46976 350 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 OTUD5Q96G74 571 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 CSADQ9Y600 493 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 SNCAIPQ9Y6H5 919 aa16.26■□□□□ 0.19
HERPUD1-202ENST00000344114 DOCK2Q92608 1830 aa16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 EPB41L2O43491 1005 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 GNRH1P01148 92 aa16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 LACTBP83111 547 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 ARHGAP39Q9C0H5 1083 aa16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 CCDC8Q9H0W5 538 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-202ENST00000344114 RFX7Q2KHR2 1363 aa16.24■□□□□ 0.19
HERPUD1-202ENST00000344114 CETPP11597 493 aa16.24■□□□□ 0.19
HERPUD1-202ENST00000344114 HDLBPQ00341 1268 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-202ENST00000344114 SH3TC2Q8TF17 1288 aa16.24■□□□□ 0.19
HERPUD1-202ENST00000344114 EVI5LQ96CN4 794 aa16.24■□□□□ 0.19
HERPUD1-202ENST00000344114 USP26Q9BXU7 913 aa16.24■□□□□ 0.19
HERPUD1-202ENST00000344114 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 H0YGN5 161 aa16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 HIP1O00291 1037 aa16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 PRMT2P55345 433 aa16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 KIF22Q14807 665 aa16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 GRIK5Q16478 980 aa16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 ERO1BQ86YB8 467 aa16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 TLR7Q9NYK1 1049 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 DBNLQ9UJU6 430 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-202ENST00000344114 ATP5JP18859 108 aa16.22■□□□□ 0.19
HERPUD1-202ENST00000344114 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
HERPUD1-202ENST00000344114 PUS3Q9BZE2 481 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-202ENST00000344114 RPAP1Q9BWH6 1393 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-202ENST00000344114 IRF6O14896 467 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 MAP4K4O95819 1239 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 MYCP01106 439 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 PPIL2Q13356 520 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 SNAPC2Q13487 334 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 LRRC24Q50LG9 513 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 FAM83AQ86UY5 434 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 WRNIP1Q96S55 665 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 MRIQ9BWK5 157 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 CEP126Q9P2H0 1117 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 AKAP2Q9Y2D5 859 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 LAMA4Q16363 1823 aa16.21■□□□□ 0.19
HERPUD1-202ENST00000344114 CACNB3P54284 484 aa16.2■□□□□ 0.18
HERPUD1-202ENST00000344114 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
HERPUD1-202ENST00000344114 C17orf99Q6UX52 265 aa16.2■□□□□ 0.18
HERPUD1-202ENST00000344114 TBC1D22AQ8WUA7 517 aa16.2■□□□□ 0.18
HERPUD1-202ENST00000344114 ZKSCAN4Q969J2 545 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-202ENST00000344114 MGAMO43451 1857 aa16.2■□□□□ 0.18
HERPUD1-202ENST00000344114 SZT2Q5T011 3432 aa16.2■□□□□ 0.18
HERPUD1-202ENST00000344114 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 RAD50Q92878 1312 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 CEP290O15078 2479 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 TRIOBPQ9H2D6 2365 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 MCCP23508 829 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 CTGFP29279 349 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 SNX21Q969T3 373 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 TEKT1Q969V4 418 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 HOOK2Q96ED9 719 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 ZDHHC15Q96MV8 337 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 KIF2CQ99661 725 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 DIAPH3Q9NSV4 1193 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 ADGRA2Q96PE1 1338 aa16.19■□□□□ 0.18
HERPUD1-202ENST00000344114 SGSM2O43147 1006 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 PPATQ06203 517 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 RABEP1Q15276 862 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 MTFR1Q15390 333 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 TICAM2Q86XR7 235 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 HSCBQ8IWL3 235 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 TBC1D2Q9BYX2 928 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 BOLA2Q9H3K6 86 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 SRRDQ9UH36 339 aa16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 IQSEC3Q9UPP2 1182 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-202ENST00000344114 A0A1B0GUL7 405 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms