RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ZNF341Q9BYN7 854 aa22.05■■□□□ 1.12
USF2-202ENST00000343550 ZFYVE28Q9HCC9 887 aa22.05■■□□□ 1.12
USF2-202ENST00000343550 ABCF2Q9UG63 623 aa22.05■■□□□ 1.12
USF2-202ENST00000343550 CETPP11597 493 aa22.04■■□□□ 1.12
USF2-202ENST00000343550 TCP10Q12799 353 aa22.04■■□□□ 1.12
USF2-202ENST00000343550 AAMPQ13685 434 aa22.04■■□□□ 1.12
USF2-202ENST00000343550 FAM43AQ8N2R8 423 aa22.04■■□□□ 1.12
USF2-202ENST00000343550 EFCC1Q9HA90 598 aa22.04■■□□□ 1.12
USF2-202ENST00000343550 PTPN22Q9Y2R2 807 aa22.04■■□□□ 1.12
USF2-202ENST00000343550 IRF6O14896 467 aa22.03■■□□□ 1.12
USF2-202ENST00000343550 NFIAQ12857 509 aa22.03■■□□□ 1.12
USF2-202ENST00000343550 SPTY2D1Q68D10 685 aaPredicted RBP22.03■■□□□ 1.12
USF2-202ENST00000343550 TBC1D9Q6ZT07 1266 aa22.03■■□□□ 1.12
USF2-202ENST00000343550 SNRKQ9NRH2 765 aa22.03■■□□□ 1.12
USF2-202ENST00000343550 USP40Q9NVE5 1235 aa22.03■■□□□ 1.12
USF2-202ENST00000343550 HTTP42858 3142 aa22.03■■□□□ 1.12
USF2-202ENST00000343550 SNAPC2Q13487 334 aa22.02■■□□□ 1.12
USF2-202ENST00000343550 LRRCC1Q9C099 1032 aa22.02■■□□□ 1.12
USF2-202ENST00000343550 INPP5BP32019 993 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 CAP1Q01518 475 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 PPIL2Q13356 520 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 ERICH6Q7L0X2 663 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 EXOC6Q8TAG9 804 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 FAM198AQ9UFP1 575 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 WDHD1O75717 1129 aaPredicted RBP22.01■■□□□ 1.11
USF2-202ENST00000343550 IFIT2P09913 472 aaKnown RBP22.01■■□□□ 1.11
USF2-202ENST00000343550 PPATQ06203 517 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 BCL11AQ9H165 835 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 ZNF112Q9UJU3 913 aa22.01■■□□□ 1.11
USF2-202ENST00000343550 BTBD19C9JJ37 291 aa22■■□□□ 1.11
USF2-202ENST00000343550 SMARCA5O60264 1052 aaPredicted RBP22■■□□□ 1.11
USF2-202ENST00000343550 CYP2E1P05181 493 aaPredicted RBP22■■□□□ 1.11
USF2-202ENST00000343550 ZCCHC17Q9NP64 241 aaKnown RBP22■■□□□ 1.11
USF2-202ENST00000343550 ZAP70P43403 619 aa21.99■■□□□ 1.11
USF2-202ENST00000343550 MECOMQ03112 1051 aa21.99■■□□□ 1.11
USF2-202ENST00000343550 ARHGEF6Q15052 776 aa21.99■■□□□ 1.11
USF2-202ENST00000343550 FAM163AQ96GL9 167 aaPredicted RBP21.99■■□□□ 1.11
USF2-202ENST00000343550 CENPFP49454 3210 aa21.99■■□□□ 1.11
USF2-202ENST00000343550 TLR2O60603 784 aa21.98■■□□□ 1.11
USF2-202ENST00000343550 DZIP1Q86YF9 867 aaKnown RBP21.98■■□□□ 1.11
USF2-202ENST00000343550 ZFPM1Q8IX07 1006 aa21.98■■□□□ 1.11
USF2-202ENST00000343550 ZNF384Q8TF68 577 aa21.98■■□□□ 1.11
USF2-202ENST00000343550 LRP2BPQ9P2M1 347 aa21.98■■□□□ 1.11
USF2-202ENST00000343550 PDE4DIPQ5VU43 2346 aa21.98■■□□□ 1.11
USF2-202ENST00000343550 SLF2Q8IX21 1173 aa21.97■■□□□ 1.11
USF2-202ENST00000343550 ARMC5Q96C12 935 aa21.97■■□□□ 1.11
USF2-202ENST00000343550 NSUN4Q96CB9 384 aaKnown RBP21.97■■□□□ 1.11
USF2-202ENST00000343550 GAKO14976 1311 aa21.97■■□□□ 1.11
USF2-202ENST00000343550 SLC34A2O95436 690 aa21.96■■□□□ 1.11
USF2-202ENST00000343550 HDAC1Q13547 482 aaPredicted RBP21.96■■□□□ 1.11
USF2-202ENST00000343550 IDI2Q9BXS1 227 aa21.96■■□□□ 1.11
USF2-202ENST00000343550 RAI14Q9P0K7 980 aa21.96■■□□□ 1.11
USF2-202ENST00000343550 ENTPD3O75355 529 aa21.96■■□□□ 1.11
USF2-202ENST00000343550 RGS3P49796 1198 aa21.96■■□□□ 1.11
USF2-202ENST00000343550 POTEFA5A3E0 1075 aa21.95■■□□□ 1.1
USF2-202ENST00000343550 NOL9Q5SY16 702 aaKnown RBP21.95■■□□□ 1.1
USF2-202ENST00000343550 PRPF38BQ5VTL8 546 aaKnown RBP21.95■■□□□ 1.1
USF2-202ENST00000343550 PIH1D3Q9NQM4 214 aaKnown RBP21.95■■□□□ 1.1
USF2-202ENST00000343550 KCNH4Q9UQ05 1017 aa21.95■■□□□ 1.1
USF2-202ENST00000343550 NDUFB9Q9Y6M9 179 aa21.95■■□□□ 1.1
USF2-202ENST00000343550 MYH2Q9UKX2 1941 aa21.95■■□□□ 1.1
USF2-202ENST00000343550 GSTO1P78417 241 aa21.94■■□□□ 1.1
USF2-202ENST00000343550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.94■■□□□ 1.1
USF2-202ENST00000343550 GPR75-ASB3A0A0A6YYF3 556 aa21.93■■□□□ 1.1
USF2-202ENST00000343550 LDHCP07864 332 aa21.93■■□□□ 1.1
USF2-202ENST00000343550 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
USF2-202ENST00000343550 LACTBP83111 547 aaPredicted RBP21.93■■□□□ 1.1
USF2-202ENST00000343550 ANKRD23Q86SG2 305 aa21.93■■□□□ 1.1
USF2-202ENST00000343550 ZSCAN29Q8IWY8 852 aaPredicted RBP21.93■■□□□ 1.1
USF2-202ENST00000343550 ANTXR1Q9H6X2 564 aa21.93■■□□□ 1.1
USF2-202ENST00000343550 MROH7-TTC4A0A0A0MT08 1334 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 PHF20L1A8MW92 1017 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 IGSF3O75054 1194 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 ATP5JP18859 108 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 BTDP43251 543 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 KIF22Q14807 665 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 SH3BP5LQ7L8J4 393 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 ARHGAP39Q9C0H5 1083 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 PTCH2Q9Y6C5 1203 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 AK9Q5TCS8 1911 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 ATRNL1Q5VV63 1379 aa21.92■■□□□ 1.1
USF2-202ENST00000343550 PDHXO00330 501 aa21.91■■□□□ 1.1
USF2-202ENST00000343550 C17orf99Q6UX52 265 aa21.91■■□□□ 1.1
USF2-202ENST00000343550 NBPF11Q86T75 865 aa21.91■■□□□ 1.1
USF2-202ENST00000343550 GCC1Q96CN9 775 aa21.91■■□□□ 1.1
USF2-202ENST00000343550 RFX7Q2KHR2 1363 aa21.91■■□□□ 1.1
USF2-202ENST00000343550 MKI67P46013 3256 aaKnown RBP21.91■■□□□ 1.1
USF2-202ENST00000343550 CXCL11O14625 94 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 MOGSQ13724 837 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 SLC9C1Q4G0N8 1177 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 NAA16Q6N069 864 aaPredicted RBP21.9■■□□□ 1.1
USF2-202ENST00000343550 ZNF333Q96JL9 665 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 RWDD1Q9H446 243 aaPredicted RBP21.9■■□□□ 1.1
USF2-202ENST00000343550 DDX4Q9NQI0 724 aaKnown RBP21.9■■□□□ 1.1
USF2-202ENST00000343550 BRCA2P51587 3418 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 DDTLA6NHG4 134 aaPredicted RBP21.9■■□□□ 1.1
USF2-202ENST00000343550 MAP3K10Q02779 954 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 PICALMQ13492 652 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 SCYL3Q8IZE3 742 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 BOLA2Q9H3K6 86 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms