RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 KIF1AQ12756 1690 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 CPLX1O14810 134 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 CORO7P57737 925 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 MORC3Q14149 939 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 NUTM2AQ8IVF1 878 aaPredicted RBP11.05□□□□□ -0.64
HOXA1-201ENST00000343060 PDILTQ8N807 584 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
HOXA1-201ENST00000343060 ABCB6Q9NP58 842 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 MED4Q9NPJ6 270 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 KCNH3Q9ULD8 1083 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
HOXA1-201ENST00000343060 TJP1Q07157 1748 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 AKR1B15C9JRZ8 316 aaPredicted RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 PBX1P40424 430 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 MTF1Q14872 753 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 IMMTQ16891 758 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 RAD9BQ6WBX8 426 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 COPS6Q7L5N1 327 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 RASGRP2Q7LDG7 609 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 APTXQ7Z2E3 356 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 KCNH5Q8NCM2 988 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 CNNM3Q8NE01 707 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 OSBP2Q969R2 916 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 AKAP2Q9Y2D5 859 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 SETD1BQ9UPS6 1966 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 EIF3CLB5ME19 914 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 KIF5CO60282 957 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 N4BP1O75113 896 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 MCM6Q14566 821 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 CASP8Q14790 479 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 WHAMMP3Q1A5X7 153 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 TTC31Q49AM3 519 aaPredicted RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 CT47A1Q5JQC4 288 aaPredicted RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 KRT40Q6A162 431 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 UBE3BQ7Z3V4 1068 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 MED15Q96RN5 788 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 EIF3CQ99613 913 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 ALG1Q9BT22 464 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 IRX2Q9BZI1 471 aaPredicted RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 VIPAS39Q9H9C1 493 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 GEMIN8Q9NWZ8 242 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 HOOK1Q9UJC3 728 aaKnown RBP11.04□□□□□ -0.64
HOXA1-201ENST00000343060 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 LAMB4A4D0S4 1761 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 GLI3P10071 1580 aa11.04□□□□□ -0.64
HOXA1-201ENST00000343060 SOWAHDA6NJG2 315 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 FAM69CQ0P6D2 419 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 POSTNQ15063 836 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 WDR93Q6P2C0 686 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 LRRC31Q6UY01 552 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 PACS2Q86VP3 889 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 NCOA7Q8NI08 942 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 CLIC6Q96NY7 704 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
HOXA1-201ENST00000343060 MYH7P12883 1935 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 CDKL5O76039 1030 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 ERCC5P28715 1186 aaPredicted RBP11.03□□□□□ -0.64
HOXA1-201ENST00000343060 VSNL1P62760 191 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 FOXR1Q6PIV2 292 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 PUF60Q9UHX1 559 aaKnown RBP11.03□□□□□ -0.64
HOXA1-201ENST00000343060 BCL9LQ86UU0 1499 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 MYO5AQ9Y4I1 1855 aaKnown RBP11.03□□□□□ -0.64
HOXA1-201ENST00000343060 WDR17Q8IZU2 1322 aa11.03□□□□□ -0.64
HOXA1-201ENST00000343060 ZFYP08048 801 aaPredicted RBP11.02□□□□□ -0.64
HOXA1-201ENST00000343060 GUCY2CP25092 1073 aa11.02□□□□□ -0.64
HOXA1-201ENST00000343060 IL15P40933 162 aaPredicted RBP11.02□□□□□ -0.64
HOXA1-201ENST00000343060 PLCD1P51178 756 aa11.02□□□□□ -0.64
HOXA1-201ENST00000343060 FOXO4P98177 505 aa11.02□□□□□ -0.64
HOXA1-201ENST00000343060 TTC39AQ5SRH9 613 aa11.02□□□□□ -0.64
HOXA1-201ENST00000343060 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.64
HOXA1-201ENST00000343060 PPM1EQ8WY54 764 aa11.02□□□□□ -0.64
HOXA1-201ENST00000343060 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.64
HOXA1-201ENST00000343060 MYO1AQ9UBC5 1043 aa11.02□□□□□ -0.64
HOXA1-201ENST00000343060 CTAGE9A4FU28 777 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 FOXN1O15353 648 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 MFAP3LO75121 409 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.65
HOXA1-201ENST00000343060 GTF2A1P52655 376 aaPredicted RBP11.02□□□□□ -0.65
HOXA1-201ENST00000343060 AMPD2Q01433 879 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 CCDC51Q96ER9 411 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 AIFM3Q96NN9 605 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 ZSWIM4Q9H7M6 989 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.65
HOXA1-201ENST00000343060 ABCC12Q96J65 1359 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 ITIH6Q6UXX5 1313 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 STK36Q9NRP7 1315 aa11.02□□□□□ -0.65
HOXA1-201ENST00000343060 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 PPFIA4O75335 1185 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 FGAP02671 866 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 MYL6BP14649 208 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 PIP4K2BP78356 416 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 LMBR1LQ6UX01 489 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 SUGP1Q8IWZ8 645 aaKnown RBP11.01□□□□□ -0.65
HOXA1-201ENST00000343060 STK11IPQ8N1F8 1099 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
HOXA1-201ENST00000343060 LZTFL1Q9NQ48 299 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms