RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 FOXD4L5Q5VV16 416 aaPredicted RBP20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 CC2D2BQ6DHV5 1058 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 STK11IPQ8N1F8 1099 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 FOXD4L4Q8WXT5 416 aaPredicted RBP20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 CNNM2Q9H8M5 875 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 MYH15Q9Y2K3 1946 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 BTDP43251 543 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 RHBDL3P58872 404 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 SBK1Q52WX2 424 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 SGIP1Q9BQI5 828 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 KRT23Q9C075 422 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 NCOA5Q9HCD5 579 aaKnown RBP20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 AOC3Q16853 763 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 PODNQ7Z5L7 613 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 SMARCC2Q8TAQ2 1214 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 LY9Q9HBG7 655 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 ANGEL1Q9UNK9 670 aaKnown RBP20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 SUGT1Q9Y2Z0 365 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 DAGLAQ9Y4D2 1042 aa20.22■□□□□ 0.83
FRMD4A-202ENST00000342409 KLF18A0A0U1RQI7 1052 aa20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 ECE2O60344 883 aa20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 USP17L8P0C7I0 530 aa20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 KIAA2012Q0VF49 1180 aa20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 FBXW7Q969H0 707 aa20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 TMEM87BQ96K49 555 aa20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 RNF41Q9H4P4 317 aaPredicted RBP20.21■□□□□ 0.83
FRMD4A-202ENST00000342409 MYH8P13535 1937 aa20.2■□□□□ 0.82
FRMD4A-202ENST00000342409 STX6O43752 255 aa20.2■□□□□ 0.82
FRMD4A-202ENST00000342409 BAG3O95817 575 aa20.2■□□□□ 0.82
FRMD4A-202ENST00000342409 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
FRMD4A-202ENST00000342409 NSUN7Q8NE18 718 aaKnown RBP20.2■□□□□ 0.82
FRMD4A-202ENST00000342409 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
FRMD4A-202ENST00000342409 MYH6P13533 1939 aa20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 ARPP21Q9UBL0 812 aaPredicted RBP20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 CCDC93Q567U6 631 aa20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 DACT2Q5SW24 774 aa20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 SGMS1Q86VZ5 419 aa20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 RAB11FIP4Q86YS3 637 aa20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 TGFBRAP1Q8WUH2 860 aa20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 LLPHQ9BRT6 129 aaKnown RBP20.19■□□□□ 0.82
FRMD4A-202ENST00000342409 YDJCA8MPS7 323 aa20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 F8W031 263 aaPredicted RBP20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 G3V3G9 751 aa20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 ZSCAN22P10073 491 aaPredicted RBP20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 DCAF8Q5TAQ9 597 aa20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 C12orf60Q5U649 245 aa20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 MCM9Q9NXL9 1143 aa20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 TTF2Q9UNY4 1162 aaKnown RBP20.18■□□□□ 0.82
FRMD4A-202ENST00000342409 GOLGA8BA8MQT2 603 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 LIFRP42702 1097 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 USP5P45974 858 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 TGFB2P61812 414 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 TMEM67Q5HYA8 995 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 STRIP1Q5VSL9 837 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 SLF2Q8IX21 1173 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 ZKSCAN3Q9BRR0 538 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 NOL10Q9BSC4 688 aaKnown RBP20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 TOMM22Q9NS69 142 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 NAP1L2Q9ULW6 460 aaPredicted RBP20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 ROBO3Q96MS0 1386 aa20.17■□□□□ 0.82
FRMD4A-202ENST00000342409 IFIT3O14879 490 aaKnown RBP20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 ORC4O43929 436 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 PRDM1O75626 825 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 POLD1P28340 1107 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 FKBP1AP62942 108 aaKnown RBP20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 SEC23AQ15436 765 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 APOA5Q6Q788 366 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 CERS3Q8IU89 383 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 TEX11Q8IYF3 940 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 SUPT20HQ8NEM7 779 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 PSMD1Q99460 953 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 MTA3Q9BTC8 594 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 SIPA1L1O43166 1804 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 PTPDC1A2A3K4 754 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 DDX11L8A8MPP1 907 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 SCNN1DP51172 638 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 SLC4A8Q2Y0W8 1093 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 GRIPAP1Q4V328 841 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 LARP1BQ659C4 914 aaKnown RBP20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 RTKN2Q8IZC4 609 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
FRMD4A-202ENST00000342409 ARFGEF1Q9Y6D6 1849 aa20.15■□□□□ 0.82
FRMD4A-202ENST00000342409 PSDA5PKW4 1024 aaPredicted RBP20.15■□□□□ 0.82
FRMD4A-202ENST00000342409 PPIP5K2O43314 1243 aa20.15■□□□□ 0.82
FRMD4A-202ENST00000342409 PCP11498 1178 aaKnown RBP20.15■□□□□ 0.82
FRMD4A-202ENST00000342409 ESR2Q92731 530 aa20.15■□□□□ 0.82
FRMD4A-202ENST00000342409 FLT1P17948 1338 aa20.14■□□□□ 0.82
FRMD4A-202ENST00000342409 USP17L3A6NCW0 530 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 USP17L4A6NCW7 530 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 F13A1P00488 732 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 FDPSP14324 419 aaKnown RBP20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 PLCG2P16885 1265 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 PTGER2P43116 358 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms