RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 SALL2Q9Y467 1007 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 MYPNQ86TC9 1320 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 GNAI3P08754 354 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 NEXNQ0ZGT2 675 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 ERFEQ4G0M1 354 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 MYSM1Q5VVJ2 828 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 SP8Q8IXZ3 490 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 CNBD1Q8NA66 436 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 SSH3Q8TE77 659 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 PHOX2BQ99453 314 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 COPRSQ9NQ92 184 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 SMC4Q9NTJ3 1288 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 BBOX1O75936 387 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 DNAJB2P25686 324 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 PLA2G5P39877 138 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 ABL2P42684 1182 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 SCNN1DP51172 638 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 HTRA3P83110 453 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 HDAC1Q13547 482 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 GRAPQ13588 217 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 SUZ12Q15022 739 aaKnown RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 RGMBQ6NW40 437 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 DZIP1LQ8IYY4 767 aaKnown RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 GRAPLQ8TC17 118 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 BSDC1Q9NW68 430 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 RNF186Q9NXI6 227 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 KIAA1522Q9P206 1035 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 DDX19BQ9UMR2 479 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 NIP7Q9Y221 180 aaKnown RBP eCLIP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 LOC285556D6RIA3 1793 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 RFX7Q2KHR2 1363 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 KCNQ4P56696 695 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 SLC6A16Q9GZN6 736 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 PRDM6Q9NQX0 595 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 GPRC5DQ9NZD1 345 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 ATP6V0A2Q9Y487 856 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 ZNF804BA4D1E1 1349 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 SCN9AQ15858 1988 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 FGFR2P21802 821 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 ZNF280AP59817 542 aaPredicted RBP4.37□□□□□ -1.71
CCDC66-202ENST00000341455 RIC3Q7Z5B4 369 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 RPAP2Q8IXW5 612 aaPredicted RBP4.37□□□□□ -1.71
CCDC66-202ENST00000341455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.37□□□□□ -1.71
CCDC66-202ENST00000341455 RBM17Q96I25 401 aaKnown RBP4.37□□□□□ -1.71
CCDC66-202ENST00000341455 MYD88Q99836 296 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 TBC1D2BQ9UPU7 963 aa4.37□□□□□ -1.71
CCDC66-202ENST00000341455 MROH5Q6ZUA9 1318 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 SALL3Q9BXA9 1300 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 SALL1Q9NSC2 1324 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 BCAR3O75815 825 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 RLBP1P12271 317 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 MYL6BP14649 208 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 CLK2P49760 499 aaKnown RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 ATP8B2P98198 1209 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 FKBP5Q13451 457 aaPredicted RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 LRIT3Q3SXY7 679 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 CDC37L1Q7L3B6 337 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 RASAL3Q86YV0 1011 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 LAS1LQ9Y4W2 734 aaKnown RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 PPP2R3BQ9Y5P8 575 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 IGHA1P01876 353 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 EIF2S2P20042 333 aaKnown RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 LMOD1P29536 600 aaPredicted RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 SREBF2Q12772 1141 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 ARHGEF6Q15052 776 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 TSR1Q2NL82 804 aaKnown RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 CCDC152Q4G0S7 254 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 NBPF5PQ86XG9 351 aaPredicted RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 CYP4X1Q8N118 509 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 TMEM57Q8N5G2 664 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 SNIP1Q8TAD8 396 aaKnown RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 ADAMTS19Q8TE59 1207 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 SUCLG2Q96I99 432 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 CDC5LQ99459 802 aaKnown RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 RIPOR2Q9Y4F9 1068 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 GREB1LQ9C091 1923 aaPredicted RBP4.36□□□□□ -1.71
CCDC66-202ENST00000341455 AOX1Q06278 1338 aa4.36□□□□□ -1.71
CCDC66-202ENST00000341455 DLL1O00548 723 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 IRS4O14654 1257 aaPredicted RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 TMEM259Q4ZIN3 620 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 PRPF40BQ6NWY9 871 aaKnown RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 CEP85Q6P2H3 762 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 ZSCAN1Q8NBB4 408 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 SYMPKQ92797 1274 aaKnown RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 MRRFQ96E11 262 aaKnown RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 ZBTB3Q9H5J0 574 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 VRTNQ9H8Y1 702 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 WNT7AO00755 349 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 CNGB1Q14028 1251 aaPredicted RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 BLOC1S3Q6QNY0 202 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 ATG9AQ7Z3C6 839 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 DDX12PQ92771 950 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 ANKRD2Q9GZV1 360 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 LEMD3Q9Y2U8 911 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 SIPA1L1O43166 1804 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 TNRC18O15417 2968 aaPredicted RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 ANXA1P04083 346 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 GNAI2P04899 355 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms