RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 ALDH1B1P30837 517 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 PPARAQ07869 468 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 HSP90AA2PQ14568 343 aaPredicted RBP8.69□□□□□ -1.02
HIPK1-201ENST00000340480 ADCK5Q3MIX3 580 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 USPL1Q5W0Q7 1092 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 NLGN1Q8N2Q7 840 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 SUPT20HQ8NEM7 779 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 XDHP47989 1333 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.69□□□□□ -1.02
HIPK1-201ENST00000340480 A0A1W2PQ27 194 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 A0A1W2PQ64 194 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 A0A1W2PQD8 194 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 UFL1O94874 794 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 RFX5P48382 616 aaPredicted RBP8.69□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF589Q86UQ0 364 aaPredicted RBP8.69□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 CALML4Q96GE6 196 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 CTAGE1Q96RT6 745 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 DDAH1O94760 285 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 NALCNQ8IZF0 1738 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 BBOX1O75936 387 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 ANO6Q4KMQ2 910 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 MYSM1Q5VVJ2 828 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 CDC37L1Q7L3B6 337 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 ERCC4Q92889 916 aaPredicted RBP8.68□□□□□ -1.02
HIPK1-201ENST00000340480 CUL5Q93034 780 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 SETD1AO15047 1707 aaKnown RBP8.68□□□□□ -1.02
HIPK1-201ENST00000340480 PDIA3P30101 505 aaKnown RBP8.68□□□□□ -1.02
HIPK1-201ENST00000340480 ADORA1P30542 326 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 CCDC96Q2M329 555 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 KRT40Q6A162 431 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 FILIP1Q7Z7B0 1213 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 FAM114A1Q8IWE2 563 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 CCDC82Q8N4S0 544 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 TEX11Q8IYF3 940 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF34Q8IZ26 560 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 SEC62Q99442 399 aaKnown RBP8.68□□□□□ -1.02
HIPK1-201ENST00000340480 TOP1P11387 765 aaKnown RBP8.68□□□□□ -1.02
HIPK1-201ENST00000340480 CCDC144CPQ8IYA2 1237 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 FBXO18Q8NFZ0 1043 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 KCNB2Q92953 911 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 EZRP15311 586 aaKnown RBP8.68□□□□□ -1.02
HIPK1-201ENST00000340480 TEX35Q5T0J7 233 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 ADALQ6DHV7 355 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 ATG9AQ7Z3C6 839 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 FERMT2Q96AC1 680 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 PRIMPOLQ96LW4 560 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF804BA4D1E1 1349 aa8.68□□□□□ -1.02
HIPK1-201ENST00000340480 GALNT17Q6IS24 598 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 RRP36Q96EU6 259 aaKnown RBP8.67□□□□□ -1.02
HIPK1-201ENST00000340480 DRC1Q96MC2 740 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 NDUFB9Q9Y6M9 179 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 ADAMTSL3P82987 1691 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 PDE6BP35913 854 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 SUSD4Q5VX71 490 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 DIS3L2Q8IYB7 885 aaKnown RBP8.67□□□□□ -1.02
HIPK1-201ENST00000340480 ARID4AP29374 1257 aaPredicted RBP8.67□□□□□ -1.02
HIPK1-201ENST00000340480 IQUBQ8NA54 791 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 NSUN7Q8NE18 718 aaKnown RBP8.67□□□□□ -1.02
HIPK1-201ENST00000340480 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 OSBP2Q969R2 916 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF622Q969S3 477 aaKnown RBP eCLIP8.67□□□□□ -1.02
HIPK1-201ENST00000340480 CYP2E1P05181 493 aaPredicted RBP8.67□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF654Q8IZM8 581 aa8.67□□□□□ -1.02
HIPK1-201ENST00000340480 SPATA31A5Q5VU36 1347 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 SPATA31A7Q8IWB4 1347 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 PPP1R9BQ96SB3 815 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 TSG101Q99816 390 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 BRIP1Q9BX63 1249 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 TMEM63CQ9P1W3 806 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 CNTNAP4Q9C0A0 1308 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 JAK2O60674 1132 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 MCTP2Q6DN12 878 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 HLFQ16534 295 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 RNF26Q9BY78 433 aaPredicted RBP8.66□□□□□ -1.02
HIPK1-201ENST00000340480 STK32BQ9NY57 414 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 RAB11FIP4Q86YS3 637 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 PDCL2Q8N4E4 241 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 RTEL1Q9NZ71 1219 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 RIPOR2Q9Y4F9 1068 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF609O15014 1411 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 NEFHP12036 1026 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 ERMNQ8TAM6 284 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 NCOA5Q9HCD5 579 aaKnown RBP8.66□□□□□ -1.02
HIPK1-201ENST00000340480 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 BCAMP50895 628 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 APOA5Q6Q788 366 aa8.66□□□□□ -1.02
HIPK1-201ENST00000340480 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 TNS2Q63HR2 1409 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 IFNAR1P17181 557 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 MAP3K9P80192 1104 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 SF3B3Q15393 1217 aaKnown RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 SLC27A3Q5K4L6 730 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 FKBP15Q5T1M5 1219 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF772Q68DY9 489 aaPredicted RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 OGFOD1Q8N543 542 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 PANK2Q9BZ23 570 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 PARP1P09874 1014 aaKnown RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 IBSPP21815 317 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 796.4 ms