RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PTCH2Q9Y6C5 1203 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 TNRC18O15417 2968 aaPredicted RBP23.93■■□□□ 1.42
ITGA4-202ENST00000339307 DDTLA6NHG4 134 aaPredicted RBP23.93■■□□□ 1.42
ITGA4-202ENST00000339307 ZBTB22O15209 634 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 LDHCP07864 332 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 LACTBP83111 547 aaPredicted RBP23.93■■□□□ 1.42
ITGA4-202ENST00000339307 SH3BP5LQ7L8J4 393 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 ANKRD23Q86SG2 305 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 NBPF11Q86T75 865 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 FAM163AQ96GL9 167 aaPredicted RBP23.93■■□□□ 1.42
ITGA4-202ENST00000339307 TMEM106CQ9BVX2 250 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 DDX4Q9NQI0 724 aaKnown RBP23.93■■□□□ 1.42
ITGA4-202ENST00000339307 ZHX2Q9Y6X8 837 aa23.93■■□□□ 1.42
ITGA4-202ENST00000339307 UQCRFS1P1P0C7P4 283 aa23.92■■□□□ 1.42
ITGA4-202ENST00000339307 TTC39AQ5SRH9 613 aa23.92■■□□□ 1.42
ITGA4-202ENST00000339307 SCYL3Q8IZE3 742 aa23.92■■□□□ 1.42
ITGA4-202ENST00000339307 KCNH4Q9UQ05 1017 aa23.92■■□□□ 1.42
ITGA4-202ENST00000339307 GPR75-ASB3A0A0A6YYF3 556 aa23.91■■□□□ 1.42
ITGA4-202ENST00000339307 SURF6O75683 361 aaKnown RBP23.91■■□□□ 1.42
ITGA4-202ENST00000339307 SLURP2P0DP57 97 aa23.91■■□□□ 1.42
ITGA4-202ENST00000339307 ARMC5Q96C12 935 aa23.91■■□□□ 1.42
ITGA4-202ENST00000339307 SNRKQ9NRH2 765 aa23.91■■□□□ 1.42
ITGA4-202ENST00000339307 PHF20L1A8MW92 1017 aa23.9■■□□□ 1.42
ITGA4-202ENST00000339307 ARID4AP29374 1257 aaPredicted RBP23.9■■□□□ 1.42
ITGA4-202ENST00000339307 MCAMP43121 646 aa23.9■■□□□ 1.42
ITGA4-202ENST00000339307 SLC4A8Q2Y0W8 1093 aa23.9■■□□□ 1.42
ITGA4-202ENST00000339307 CCDC158Q5M9N0 1113 aa23.9■■□□□ 1.42
ITGA4-202ENST00000339307 NSUN4Q96CB9 384 aaKnown RBP23.9■■□□□ 1.42
ITGA4-202ENST00000339307 NOL10Q9BSC4 688 aaKnown RBP23.9■■□□□ 1.42
ITGA4-202ENST00000339307 DOCK2Q92608 1830 aa23.9■■□□□ 1.42
ITGA4-202ENST00000339307 PDE4DIPQ5VU43 2346 aa23.89■■□□□ 1.41
ITGA4-202ENST00000339307 CXCL11O14625 94 aa23.89■■□□□ 1.41
ITGA4-202ENST00000339307 ATP8B2P98198 1209 aa23.89■■□□□ 1.41
ITGA4-202ENST00000339307 PRPF38BQ5VTL8 546 aaKnown RBP23.89■■□□□ 1.41
ITGA4-202ENST00000339307 GADL1Q6ZQY3 521 aa23.89■■□□□ 1.41
ITGA4-202ENST00000339307 FMNL1O95466 1100 aaPredicted RBP23.88■■□□□ 1.41
ITGA4-202ENST00000339307 PTPRAP18433 802 aa23.88■■□□□ 1.41
ITGA4-202ENST00000339307 TNNI3KQ59H18 835 aa23.88■■□□□ 1.41
ITGA4-202ENST00000339307 C17orf99Q6UX52 265 aa23.88■■□□□ 1.41
ITGA4-202ENST00000339307 ZNF384Q8TF68 577 aa23.88■■□□□ 1.41
ITGA4-202ENST00000339307 FPGT-TNNI3KV9GXZ4 949 aa23.88■■□□□ 1.41
ITGA4-202ENST00000339307 EN2P19622 333 aaPredicted RBP23.87■■□□□ 1.41
ITGA4-202ENST00000339307 PSMC4P43686 418 aa23.87■■□□□ 1.41
ITGA4-202ENST00000339307 RHBDL3P58872 404 aa23.87■■□□□ 1.41
ITGA4-202ENST00000339307 POLA2Q14181 598 aa23.87■■□□□ 1.41
ITGA4-202ENST00000339307 FASTKD5Q7L8L6 764 aaKnown RBP23.87■■□□□ 1.41
ITGA4-202ENST00000339307 SH3TC2Q8TF17 1288 aa23.87■■□□□ 1.41
ITGA4-202ENST00000339307 PARK7Q99497 189 aaKnown RBP23.87■■□□□ 1.41
ITGA4-202ENST00000339307 DBNDD2Q9BQY9 259 aa23.87■■□□□ 1.41
ITGA4-202ENST00000339307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.87■■□□□ 1.41
ITGA4-202ENST00000339307 ATRNL1Q5VV63 1379 aa23.87■■□□□ 1.41
ITGA4-202ENST00000339307 FAM196BA6NMK8 535 aa23.86■■□□□ 1.41
ITGA4-202ENST00000339307 CTNND1O60716 968 aaKnown RBP23.86■■□□□ 1.41
ITGA4-202ENST00000339307 CYP2C8P10632 490 aa23.86■■□□□ 1.41
ITGA4-202ENST00000339307 TEX11Q8IYF3 940 aa23.86■■□□□ 1.41
ITGA4-202ENST00000339307 SSH3Q8TE77 659 aa23.86■■□□□ 1.41
ITGA4-202ENST00000339307 ZNF333Q96JL9 665 aa23.86■■□□□ 1.41
ITGA4-202ENST00000339307 RFX7Q2KHR2 1363 aa23.86■■□□□ 1.41
ITGA4-202ENST00000339307 TRIM75PA6NK02 468 aa23.85■■□□□ 1.41
ITGA4-202ENST00000339307 GNRH1P01148 92 aa23.85■■□□□ 1.41
ITGA4-202ENST00000339307 MOGSQ13724 837 aa23.85■■□□□ 1.41
ITGA4-202ENST00000339307 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.85■■□□□ 1.41
ITGA4-202ENST00000339307 ZSWIM8A7E2V4 1837 aa23.85■■□□□ 1.41
ITGA4-202ENST00000339307 HOXD10P28358 340 aa23.84■■□□□ 1.41
ITGA4-202ENST00000339307 NAA16Q6N069 864 aaPredicted RBP23.84■■□□□ 1.41
ITGA4-202ENST00000339307 GPAT2Q6NUI2 795 aa23.84■■□□□ 1.41
ITGA4-202ENST00000339307 CCDC84Q86UT8 332 aaPredicted RBP23.84■■□□□ 1.41
ITGA4-202ENST00000339307 GPR108Q9NPR9 543 aa23.84■■□□□ 1.41
ITGA4-202ENST00000339307 AFG3L2Q9Y4W6 797 aa23.84■■□□□ 1.41
ITGA4-202ENST00000339307 RLBP1P12271 317 aa23.84■■□□□ 1.41
ITGA4-202ENST00000339307 SH3RF3Q8TEJ3 882 aaPredicted RBP23.84■■□□□ 1.41
ITGA4-202ENST00000339307 AATFQ9NY61 560 aaKnown RBP eCLIP23.84■■□□□ 1.41
ITGA4-202ENST00000339307 A0A0G2JLL6 359 aaPredicted RBP23.83■■□□□ 1.4
ITGA4-202ENST00000339307 ZBTB7BO15156 539 aaPredicted RBP23.83■■□□□ 1.4
ITGA4-202ENST00000339307 BAG3O95817 575 aa23.83■■□□□ 1.4
ITGA4-202ENST00000339307 MAP4K4O95819 1239 aaPredicted RBP23.83■■□□□ 1.4
ITGA4-202ENST00000339307 PRMT2P55345 433 aa23.83■■□□□ 1.4
ITGA4-202ENST00000339307 MAP3K10Q02779 954 aa23.83■■□□□ 1.4
ITGA4-202ENST00000339307 PRRT2Q7Z6L0 340 aaPredicted RBP23.83■■□□□ 1.4
ITGA4-202ENST00000339307 RAET1EQ8TD07 263 aa23.83■■□□□ 1.4
ITGA4-202ENST00000339307 TRIM47Q96LD4 638 aa23.83■■□□□ 1.4
ITGA4-202ENST00000339307 OSBPL5Q9H0X9 879 aaPredicted RBP23.83■■□□□ 1.4
ITGA4-202ENST00000339307 SLC34A2O95436 690 aa23.82■■□□□ 1.4
ITGA4-202ENST00000339307 CTGFP29279 349 aa23.82■■□□□ 1.4
ITGA4-202ENST00000339307 CCDC8Q9H0W5 538 aaPredicted RBP23.82■■□□□ 1.4
ITGA4-202ENST00000339307 TBC1D12O60347 775 aa23.81■■□□□ 1.4
ITGA4-202ENST00000339307 NPM3O75607 178 aaKnown RBP23.81■■□□□ 1.4
ITGA4-202ENST00000339307 OSBPP22059 807 aa23.81■■□□□ 1.4
ITGA4-202ENST00000339307 SMCR8Q8TEV9 937 aaPredicted RBP23.81■■□□□ 1.4
ITGA4-202ENST00000339307 SRRDQ9UH36 339 aa23.81■■□□□ 1.4
ITGA4-202ENST00000339307 HTTP42858 3142 aa23.81■■□□□ 1.4
ITGA4-202ENST00000339307 FCGRTP55899 365 aa23.8■■□□□ 1.4
ITGA4-202ENST00000339307 BIN2Q9UBW5 565 aaPredicted RBP23.8■■□□□ 1.4
ITGA4-202ENST00000339307 MYPNQ86TC9 1320 aa23.8■■□□□ 1.4
ITGA4-202ENST00000339307 ADGRA2Q96PE1 1338 aa23.8■■□□□ 1.4
ITGA4-202ENST00000339307 DOCK1Q14185 1865 aa23.8■■□□□ 1.4
ITGA4-202ENST00000339307 CYP2E1P05181 493 aaPredicted RBP23.79■■□□□ 1.4
ITGA4-202ENST00000339307 ZAP70P43403 619 aa23.79■■□□□ 1.4
ITGA4-202ENST00000339307 PANK1Q8TE04 598 aa23.79■■□□□ 1.4
ITGA4-202ENST00000339307 TGFBRAP1Q8WUH2 860 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms