RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 JARID2Q92833 1246 aaPredicted RBP12.62□□□□□ -0.39
RTN3-201ENST00000338850 DBNDD2Q9BQY9 259 aa12.62□□□□□ -0.39
RTN3-201ENST00000338850 SIL1Q9H173 461 aa12.62□□□□□ -0.39
RTN3-201ENST00000338850 DBNDD1Q9H9R9 158 aa12.62□□□□□ -0.39
RTN3-201ENST00000338850 PAG1Q9NWQ8 432 aa12.62□□□□□ -0.39
RTN3-201ENST00000338850 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
RTN3-201ENST00000338850 ABT1Q9ULW3 272 aaKnown RBP12.62□□□□□ -0.39
RTN3-201ENST00000338850 R3HCC1Q9Y3T6 440 aaKnown RBP12.62□□□□□ -0.39
RTN3-201ENST00000338850 MRVI1Q9Y6F6 885 aa12.62□□□□□ -0.39
RTN3-201ENST00000338850 UQCRHLA0A096LP55 91 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 SHTN1A0MZ66 631 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 PSMD14O00487 310 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 UQCRHP07919 91 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
RTN3-201ENST00000338850 CCDC152Q4G0S7 254 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 CST9Q5W186 159 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 KIAA1524Q8TCG1 905 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 TRPM4Q8TD43 1214 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
RTN3-201ENST00000338850 EYA3Q99504 573 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 TNMDQ9H2S6 317 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 CNOT7Q9UIV1 285 aaKnown RBP12.61□□□□□ -0.39
RTN3-201ENST00000338850 RCOR1Q9UKL0 485 aa12.61□□□□□ -0.39
RTN3-201ENST00000338850 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
RTN3-201ENST00000338850 RTL9Q8NET4 1388 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 GOLGA6L4A6NEF3 574 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 ECE2O60344 883 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 DHX8Q14562 1220 aaKnown RBP12.6□□□□□ -0.39
RTN3-201ENST00000338850 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 LMBR1LQ6UX01 489 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 Q6ZUG5 572 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 NSUN7Q8NE18 718 aaKnown RBP12.6□□□□□ -0.39
RTN3-201ENST00000338850 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
RTN3-201ENST00000338850 DPF2Q92785 391 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 BRF1Q92994 677 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
RTN3-201ENST00000338850 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
RTN3-201ENST00000338850 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
RTN3-201ENST00000338850 GLIS2Q9BZE0 524 aaPredicted RBP12.6□□□□□ -0.39
RTN3-201ENST00000338850 CTNNA3Q9UI47 895 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
RTN3-201ENST00000338850 H7C1D1 291 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 RNF113AO15541 343 aaKnown RBP12.59□□□□□ -0.39
RTN3-201ENST00000338850 NEMFO60524 1076 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 UFL1O94874 794 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 LIG1P18858 919 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 PLA2G4DQ86XP0 818 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 KLHDC4Q8TBB5 520 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 KCNQ5Q9NR82 932 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 TLL2Q9Y6L7 1015 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 ZMYM6O95789 1325 aa12.59□□□□□ -0.39
RTN3-201ENST00000338850 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 A0A1W2PQ27 194 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 A0A1W2PQ64 194 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 A0A1W2PQD8 194 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 RPS12P25398 132 aaKnown RBP12.58□□□□□ -0.4
RTN3-201ENST00000338850 ADD1P35611 737 aaKnown RBP12.58□□□□□ -0.4
RTN3-201ENST00000338850 CTCFP49711 727 aaPredicted RBP12.58□□□□□ -0.4
RTN3-201ENST00000338850 CTSWP56202 376 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 SCRN1Q12765 414 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 FOXD4L6Q3SYB3 417 aaPredicted RBP12.58□□□□□ -0.4
RTN3-201ENST00000338850 FOXD4L3Q6VB84 417 aaPredicted RBP12.58□□□□□ -0.4
RTN3-201ENST00000338850 STOX1Q6ZVD7 989 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 CAPNS2Q96L46 248 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
RTN3-201ENST00000338850 ZC3H12CQ9C0D7 883 aaKnown RBP12.58□□□□□ -0.4
RTN3-201ENST00000338850 PRDM10Q9NQV6 1147 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 GGA1Q9UJY5 639 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 TAF6LQ9Y6J9 622 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 MAST3O60307 1309 aa12.58□□□□□ -0.4
RTN3-201ENST00000338850 H3BQV1 296 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 CELF2O95319 508 aaKnown RBP12.57□□□□□ -0.4
RTN3-201ENST00000338850 EGFRP00533 1210 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 SYCP1Q15431 976 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 CYP4F22Q6NT55 531 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 SAMD7Q7Z3H4 446 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 TTLL11Q8NHH1 800 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 MRFAP1L1Q96HT8 127 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 THSD7BQ9C0I4 1608 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 XDHP47989 1333 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 TRPM7Q96QT4 1865 aa12.57□□□□□ -0.4
RTN3-201ENST00000338850 DHX16O60231 1041 aaKnown RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 CAPN15O75808 1086 aa12.56□□□□□ -0.4
RTN3-201ENST00000338850 CSF1RP07333 972 aa12.56□□□□□ -0.4
RTN3-201ENST00000338850 VIL1P09327 827 aaKnown RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 HSPD1P10809 573 aaKnown RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 ECE1P42892 770 aa12.56□□□□□ -0.4
RTN3-201ENST00000338850 MAP2K1Q02750 393 aaPredicted RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 STX1AQ16623 288 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms