RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 MECOMQ03112 1051 aa14.25□□□□□ -0.13
TREM2-201ENST00000338469 FAM163AQ96GL9 167 aaPredicted RBP14.25□□□□□ -0.13
TREM2-201ENST00000338469 ZNF341Q9BYN7 854 aa14.25□□□□□ -0.13
TREM2-201ENST00000338469 ARHGAP39Q9C0H5 1083 aa14.25□□□□□ -0.13
TREM2-201ENST00000338469 PTPN22Q9Y2R2 807 aa14.25□□□□□ -0.13
TREM2-201ENST00000338469 PCDHB15Q9Y5E8 787 aa14.25□□□□□ -0.13
TREM2-201ENST00000338469 AK9Q5TCS8 1911 aa14.25□□□□□ -0.13
TREM2-201ENST00000338469 HMMRO75330 724 aa14.24□□□□□ -0.13
TREM2-201ENST00000338469 CTGFP29279 349 aa14.24□□□□□ -0.13
TREM2-201ENST00000338469 MCAMP43121 646 aa14.24□□□□□ -0.13
TREM2-201ENST00000338469 PPIL2Q13356 520 aa14.24□□□□□ -0.13
TREM2-201ENST00000338469 TAF1CQ15572 869 aaPredicted RBP14.24□□□□□ -0.13
TREM2-201ENST00000338469 OTUD7BQ6GQQ9 843 aa14.24□□□□□ -0.13
TREM2-201ENST00000338469 IDI2Q9BXS1 227 aa14.24□□□□□ -0.13
TREM2-201ENST00000338469 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.24□□□□□ -0.13
TREM2-201ENST00000338469 PDS5AQ29RF7 1337 aaKnown RBP14.23□□□□□ -0.13
TREM2-201ENST00000338469 POTEFA5A3E0 1075 aa14.23□□□□□ -0.13
TREM2-201ENST00000338469 ARID4AP29374 1257 aaPredicted RBP14.23□□□□□ -0.13
TREM2-201ENST00000338469 BTDP43251 543 aa14.23□□□□□ -0.13
TREM2-201ENST00000338469 MAP3K10Q02779 954 aa14.23□□□□□ -0.13
TREM2-201ENST00000338469 DCAF15Q66K64 600 aa14.23□□□□□ -0.13
TREM2-201ENST00000338469 SPATA5Q8NB90 893 aa14.23□□□□□ -0.13
TREM2-201ENST00000338469 SSH3Q8TE77 659 aa14.23□□□□□ -0.13
TREM2-201ENST00000338469 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
TREM2-201ENST00000338469 MROH7-TTC4A0A0A0MT08 1334 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 ECM2O94769 699 aaPredicted RBP14.22□□□□□ -0.13
TREM2-201ENST00000338469 PPATQ06203 517 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 G3BP1Q13283 466 aaKnown RBP eCLIP14.22□□□□□ -0.13
TREM2-201ENST00000338469 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 NOL9Q5SY16 702 aaKnown RBP14.22□□□□□ -0.13
TREM2-201ENST00000338469 GPAT2Q6NUI2 795 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 CCDC84Q86UT8 332 aaPredicted RBP14.22□□□□□ -0.13
TREM2-201ENST00000338469 SIRT2Q8IXJ6 389 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 NSUN4Q96CB9 384 aaKnown RBP14.22□□□□□ -0.13
TREM2-201ENST00000338469 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 DBNDD2Q9BQY9 259 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 EFCC1Q9HA90 598 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 ZFYVE28Q9HCC9 887 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 SNRKQ9NRH2 765 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 KCNH4Q9UQ05 1017 aa14.22□□□□□ -0.13
TREM2-201ENST00000338469 FAM196BA6NMK8 535 aa14.21□□□□□ -0.13
TREM2-201ENST00000338469 TLR2O60603 784 aa14.21□□□□□ -0.13
TREM2-201ENST00000338469 ENTPD3O75355 529 aa14.21□□□□□ -0.13
TREM2-201ENST00000338469 CETPP11597 493 aa14.21□□□□□ -0.13
TREM2-201ENST00000338469 PICALMQ13492 652 aa14.21□□□□□ -0.13
TREM2-201ENST00000338469 RRP1BQ14684 758 aaKnown RBP14.21□□□□□ -0.13
TREM2-201ENST00000338469 ERICH6Q7L0X2 663 aa14.21□□□□□ -0.13
TREM2-201ENST00000338469 DZIP1Q86YF9 867 aaKnown RBP14.21□□□□□ -0.13
TREM2-201ENST00000338469 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
TREM2-201ENST00000338469 PPP4R2Q9NY27 417 aa14.21□□□□□ -0.13
TREM2-201ENST00000338469 KIAA0100Q14667 2235 aaKnown RBP14.21□□□□□ -0.14
TREM2-201ENST00000338469 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 HDAC1Q13547 482 aaPredicted RBP14.2□□□□□ -0.14
TREM2-201ENST00000338469 TNNI3KQ59H18 835 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 C17orf99Q6UX52 265 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 ADGRA1Q86SQ6 560 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 ZGPATQ8N5A5 531 aaKnown RBP14.2□□□□□ -0.14
TREM2-201ENST00000338469 HOOK2Q96ED9 719 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 TLR7Q9NYK1 1049 aaKnown RBP14.2□□□□□ -0.14
TREM2-201ENST00000338469 CPA4Q9UI42 421 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 PTCH2Q9Y6C5 1203 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 FPGT-TNNI3KV9GXZ4 949 aa14.2□□□□□ -0.14
TREM2-201ENST00000338469 MYO5AQ9Y4I1 1855 aaKnown RBP14.2□□□□□ -0.14
TREM2-201ENST00000338469 SPTY2D1Q68D10 685 aaPredicted RBP14.19□□□□□ -0.14
TREM2-201ENST00000338469 ARMC5Q96C12 935 aa14.19□□□□□ -0.14
TREM2-201ENST00000338469 CCDC136Q96JN2 1154 aa14.19□□□□□ -0.14
TREM2-201ENST00000338469 NOP58Q9Y2X3 529 aaKnown RBP14.19□□□□□ -0.14
TREM2-201ENST00000338469 DOCK2Q92608 1830 aa14.19□□□□□ -0.14
TREM2-201ENST00000338469 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 PDHXO00330 501 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
TREM2-201ENST00000338469 CYP2E1P05181 493 aaPredicted RBP14.18□□□□□ -0.14
TREM2-201ENST00000338469 PTPRAP18433 802 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 LACTBP83111 547 aaPredicted RBP14.18□□□□□ -0.14
TREM2-201ENST00000338469 GORABQ5T7V8 394 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 ANKRD23Q86SG2 305 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 SH3RF3Q8TEJ3 882 aaPredicted RBP14.18□□□□□ -0.14
TREM2-201ENST00000338469 EAF2Q96CJ1 260 aaPredicted RBP14.18□□□□□ -0.14
TREM2-201ENST00000338469 CCDC8Q9H0W5 538 aaPredicted RBP14.18□□□□□ -0.14
TREM2-201ENST00000338469 GPR108Q9NPR9 543 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 DBNLQ9UJU6 430 aaKnown RBP14.18□□□□□ -0.14
TREM2-201ENST00000338469 AFG3L2Q9Y4W6 797 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 GTF3C3Q9Y5Q9 886 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 ZHX2Q9Y6X8 837 aa14.18□□□□□ -0.14
TREM2-201ENST00000338469 IGHDP01880 384 aa14.17□□□□□ -0.14
TREM2-201ENST00000338469 CYP2C8P10632 490 aa14.17□□□□□ -0.14
TREM2-201ENST00000338469 EN2P19622 333 aaPredicted RBP14.17□□□□□ -0.14
TREM2-201ENST00000338469 JAG1P78504 1218 aa14.17□□□□□ -0.14
TREM2-201ENST00000338469 OS9Q13438 667 aaPredicted RBP14.17□□□□□ -0.14
TREM2-201ENST00000338469 ZSCAN29Q8IWY8 852 aaPredicted RBP14.17□□□□□ -0.14
TREM2-201ENST00000338469 SCYL3Q8IZE3 742 aa14.17□□□□□ -0.14
TREM2-201ENST00000338469 ZCCHC17Q9NP64 241 aaKnown RBP14.17□□□□□ -0.14
TREM2-201ENST00000338469 PIH1D3Q9NQM4 214 aaKnown RBP14.17□□□□□ -0.14
TREM2-201ENST00000338469 RAI14Q9P0K7 980 aa14.17□□□□□ -0.14
TREM2-201ENST00000338469 NDUFB9Q9Y6M9 179 aa14.17□□□□□ -0.14
TREM2-201ENST00000338469 CXCL11O14625 94 aa14.16□□□□□ -0.14
TREM2-201ENST00000338469 ZAP70P43403 619 aa14.16□□□□□ -0.14
TREM2-201ENST00000338469 SHROOM1Q2M3G4 852 aaPredicted RBP14.16□□□□□ -0.14
TREM2-201ENST00000338469 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms