RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 HOOK2Q96ED9 719 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 ERO1AQ96HE7 468 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 ARHGAP39Q9C0H5 1083 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 PTPN22Q9Y2R2 807 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 FPGT-TNNI3KV9GXZ4 949 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 TNRC18O15417 2968 aaPredicted RBP16.47■□□□□ 0.23
NUDCD3-201ENST00000338427 MROH7-TTC4A0A0A0MT08 1334 aa16.47■□□□□ 0.23
NUDCD3-201ENST00000338427 FAM196BA6NMK8 535 aa16.47■□□□□ 0.23
NUDCD3-201ENST00000338427 ENTPD3O75355 529 aa16.47■□□□□ 0.23
NUDCD3-201ENST00000338427 MOGSQ13724 837 aa16.47■□□□□ 0.23
NUDCD3-201ENST00000338427 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
NUDCD3-201ENST00000338427 PDS5AQ29RF7 1337 aaKnown RBP16.46■□□□□ 0.23
NUDCD3-201ENST00000338427 CPA4Q9UI42 421 aa16.46■□□□□ 0.23
NUDCD3-201ENST00000338427 RPAP1Q9BWH6 1393 aaPredicted RBP16.46■□□□□ 0.23
NUDCD3-201ENST00000338427 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 POTEFA5A3E0 1075 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 SLF2Q8IX21 1173 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 EAF2Q96CJ1 260 aaPredicted RBP16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 ZHX2Q9Y6X8 837 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 ATRNL1Q5VV63 1379 aa16.45■□□□□ 0.22
NUDCD3-201ENST00000338427 PDHXO00330 501 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 TLR2O60603 784 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 LDHCP07864 332 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 CTGFP29279 349 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 ZAP70P43403 619 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 MAP3K10Q02779 954 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 NOL9Q5SY16 702 aaKnown RBP16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 GPAT2Q6NUI2 795 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 CEP85Q6P2H3 762 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 ADGRA1Q86SQ6 560 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 SH3RF3Q8TEJ3 882 aaPredicted RBP16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 GPR108Q9NPR9 543 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 DBNLQ9UJU6 430 aaKnown RBP16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 KCNH4Q9UQ05 1017 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 EXOC6BQ9Y2D4 811 aa16.44■□□□□ 0.22
NUDCD3-201ENST00000338427 LAMB1P07942 1786 aa16.43■□□□□ 0.22
NUDCD3-201ENST00000338427 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
NUDCD3-201ENST00000338427 MYCP01106 439 aaPredicted RBP16.43■□□□□ 0.22
NUDCD3-201ENST00000338427 PTPRAP18433 802 aa16.43■□□□□ 0.22
NUDCD3-201ENST00000338427 C17orf99Q6UX52 265 aa16.43■□□□□ 0.22
NUDCD3-201ENST00000338427 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
NUDCD3-201ENST00000338427 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
NUDCD3-201ENST00000338427 GSTO1P78417 241 aa16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 CCDC158Q5M9N0 1113 aa16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 TEX11Q8IYF3 940 aa16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 AATFQ9NY61 560 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 AFG3L2Q9Y4W6 797 aa16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 ZSWIM8A7E2V4 1837 aa16.42■□□□□ 0.22
NUDCD3-201ENST00000338427 CYP2C8P10632 490 aa16.41■□□□□ 0.22
NUDCD3-201ENST00000338427 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
NUDCD3-201ENST00000338427 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
NUDCD3-201ENST00000338427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.41■□□□□ 0.22
NUDCD3-201ENST00000338427 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
NUDCD3-201ENST00000338427 HTTP42858 3142 aa16.41■□□□□ 0.22
NUDCD3-201ENST00000338427 APBB1O00213 710 aa16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 CXCL11O14625 94 aa16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 EN2P19622 333 aaPredicted RBP16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 GADL1Q6ZQY3 521 aa16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 OSBPL5Q9H0X9 879 aaPredicted RBP16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 PICK1Q9NRD5 415 aa16.4■□□□□ 0.22
NUDCD3-201ENST00000338427 MYO5AQ9Y4I1 1855 aaKnown RBP16.39■□□□□ 0.22
NUDCD3-201ENST00000338427 CENPFP49454 3210 aa16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 CTNND1O60716 968 aaKnown RBP16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 JAG1P78504 1218 aa16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 LACTBP83111 547 aaPredicted RBP16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 MAPKAPK5Q8IW41 473 aa16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 TGFBRAP1Q8WUH2 860 aa16.39■□□□□ 0.21
NUDCD3-201ENST00000338427 A0A0G2JLL6 359 aaPredicted RBP16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 TRIM75PA6NK02 468 aa16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 PSMC4P43686 418 aa16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 SHROOM1Q2M3G4 852 aaPredicted RBP16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 SLC4A8Q2Y0W8 1093 aa16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 PRRT2Q7Z6L0 340 aaPredicted RBP16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 ZCCHC17Q9NP64 241 aaKnown RBP16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
NUDCD3-201ENST00000338427 TBC1D12O60347 775 aa16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 CYP7A1P22680 504 aa16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 PPP4CP60510 307 aa16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 C20orf194Q5TEA3 1177 aa16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 AACSQ86V21 672 aa16.37■□□□□ 0.21
NUDCD3-201ENST00000338427 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms