RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 SAGE1Q9NXZ1 904 aa18.23■□□□□ 0.51
KATNA1-201ENST00000335643 AATFQ9NY61 560 aaKnown RBP eCLIP18.23■□□□□ 0.51
KATNA1-201ENST00000335643 SIPA1L1O43166 1804 aa18.23■□□□□ 0.51
KATNA1-201ENST00000335643 LDHCP07864 332 aa18.22■□□□□ 0.51
KATNA1-201ENST00000335643 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
KATNA1-201ENST00000335643 TNS4Q8IZW8 715 aa18.22■□□□□ 0.51
KATNA1-201ENST00000335643 EDC3Q96F86 508 aaKnown RBP18.22■□□□□ 0.51
KATNA1-201ENST00000335643 DCTPP1Q9H773 170 aa18.22■□□□□ 0.51
KATNA1-201ENST00000335643 HTTP42858 3142 aa18.22■□□□□ 0.51
KATNA1-201ENST00000335643 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
KATNA1-201ENST00000335643 REM2Q8IYK8 340 aaPredicted RBP18.21■□□□□ 0.51
KATNA1-201ENST00000335643 LRRCC1Q9C099 1032 aa18.21■□□□□ 0.51
KATNA1-201ENST00000335643 CENPFP49454 3210 aa18.21■□□□□ 0.51
KATNA1-201ENST00000335643 IGF2BP3O00425 579 aaKnown RBP eCLIP18.21■□□□□ 0.51
KATNA1-201ENST00000335643 OTUD5Q96G74 571 aa18.21■□□□□ 0.51
KATNA1-201ENST00000335643 ZNF341Q9BYN7 854 aa18.21■□□□□ 0.51
KATNA1-201ENST00000335643 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
KATNA1-201ENST00000335643 ZNF112Q9UJU3 913 aa18.21■□□□□ 0.51
KATNA1-201ENST00000335643 TBC1D8O95759 1140 aa18.2■□□□□ 0.5
KATNA1-201ENST00000335643 DYNLL1P63167 89 aaKnown RBP18.2■□□□□ 0.5
KATNA1-201ENST00000335643 SREBF2Q12772 1141 aa18.2■□□□□ 0.5
KATNA1-201ENST00000335643 DCAF15Q66K64 600 aa18.2■□□□□ 0.5
KATNA1-201ENST00000335643 TEX11Q8IYF3 940 aa18.2■□□□□ 0.5
KATNA1-201ENST00000335643 MS4A4AQ96JQ5 239 aa18.2■□□□□ 0.5
KATNA1-201ENST00000335643 PTPN18Q99952 460 aa18.2■□□□□ 0.5
KATNA1-201ENST00000335643 CSADQ9Y600 493 aa18.2■□□□□ 0.5
KATNA1-201ENST00000335643 MANSC4A6NHS7 340 aaPredicted RBP18.19■□□□□ 0.5
KATNA1-201ENST00000335643 SPDYE5A6NIY4 337 aa18.19■□□□□ 0.5
KATNA1-201ENST00000335643 PHF20L1A8MW92 1017 aa18.19■□□□□ 0.5
KATNA1-201ENST00000335643 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
KATNA1-201ENST00000335643 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
KATNA1-201ENST00000335643 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
KATNA1-201ENST00000335643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.19■□□□□ 0.5
KATNA1-201ENST00000335643 HOOK2Q96ED9 719 aa18.19■□□□□ 0.5
KATNA1-201ENST00000335643 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
KATNA1-201ENST00000335643 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
KATNA1-201ENST00000335643 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 GOLIM4O00461 696 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 CYP7A1P22680 504 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 PPP4CP60510 307 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 MAP3K10Q02779 954 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 IFNL1Q8IU54 200 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 MIGA1Q8NAN2 632 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 BOLA2Q9H3K6 86 aa18.18■□□□□ 0.5
KATNA1-201ENST00000335643 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
KATNA1-201ENST00000335643 COL2A1P02458 1487 aaPredicted RBP18.17■□□□□ 0.5
KATNA1-201ENST00000335643 DOCK1Q14185 1865 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 TESPA1A2RU30 521 aaPredicted RBP18.17■□□□□ 0.5
KATNA1-201ENST00000335643 IRF6O14896 467 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 CHGBP05060 677 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 ATP5JP18859 108 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 SLFNL1Q499Z3 407 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 TSHZ3Q63HK5 1081 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 MAPKAPK5Q8IW41 473 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 TGFBRAP1Q8WUH2 860 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 PHIPQ8WWQ0 1821 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 BRI3BPQ8WY22 251 aa18.17■□□□□ 0.5
KATNA1-201ENST00000335643 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.17■□□□□ 0.5
KATNA1-201ENST00000335643 FLT1P17948 1338 aa18.16■□□□□ 0.5
KATNA1-201ENST00000335643 BAG3O95817 575 aa18.16■□□□□ 0.5
KATNA1-201ENST00000335643 MAP4K4O95819 1239 aaPredicted RBP18.16■□□□□ 0.5
KATNA1-201ENST00000335643 ERO1BQ86YB8 467 aa18.16■□□□□ 0.5
KATNA1-201ENST00000335643 ATAD5Q96QE3 1844 aa18.15■□□□□ 0.5
KATNA1-201ENST00000335643 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
KATNA1-201ENST00000335643 MYH7P12883 1935 aa18.15■□□□□ 0.5
KATNA1-201ENST00000335643 INHBEP58166 350 aa18.15■□□□□ 0.5
KATNA1-201ENST00000335643 MAP3K12Q12852 859 aa18.15■□□□□ 0.5
KATNA1-201ENST00000335643 NOL9Q5SY16 702 aaKnown RBP18.15■□□□□ 0.5
KATNA1-201ENST00000335643 HAUS7Q99871 368 aa18.15■□□□□ 0.5
KATNA1-201ENST00000335643 NOL10Q9BSC4 688 aaKnown RBP18.15■□□□□ 0.5
KATNA1-201ENST00000335643 MYH1P12882 1939 aa18.14■□□□□ 0.5
KATNA1-201ENST00000335643 TCRBV5S4A2TA0A5A2 114 aa18.14■□□□□ 0.49
KATNA1-201ENST00000335643 IGSF3O75054 1194 aa18.14■□□□□ 0.49
KATNA1-201ENST00000335643 PDE6AP16499 860 aa18.14■□□□□ 0.49
KATNA1-201ENST00000335643 RRP1BQ14684 758 aaKnown RBP18.14■□□□□ 0.49
KATNA1-201ENST00000335643 RIOK1Q9BRS2 568 aaKnown RBP18.14■□□□□ 0.49
KATNA1-201ENST00000335643 CFHR5Q9BXR6 569 aa18.14■□□□□ 0.49
KATNA1-201ENST00000335643 PAG1Q9NWQ8 432 aa18.14■□□□□ 0.49
KATNA1-201ENST00000335643 CCL15-CCL14A0A0B4J2E2 113 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 PLCG2P16885 1265 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 PPIL2Q13356 520 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 TTF1Q15361 905 aaPredicted RBP18.13■□□□□ 0.49
KATNA1-201ENST00000335643 CCL15Q16663 113 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 SLC9C2Q5TAH2 1124 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 OTUD7AQ8TE49 926 aaPredicted RBP18.13■□□□□ 0.49
KATNA1-201ENST00000335643 ZNF296Q8WUU4 475 aaPredicted RBP18.13■□□□□ 0.49
KATNA1-201ENST00000335643 ZNF532Q9HCE3 1301 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 BRCA2P51587 3418 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 GTF2A2P52657 109 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 PPATQ06203 517 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 SLC4A8Q2Y0W8 1093 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 CCDC84Q86UT8 332 aaPredicted RBP18.13■□□□□ 0.49
KATNA1-201ENST00000335643 SCYL3Q8IZE3 742 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 EXOC6Q8TAG9 804 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 DNAJC18Q9H819 358 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 SAP30BPQ9UHR5 308 aaKnown RBP18.13■□□□□ 0.49
KATNA1-201ENST00000335643 PALD1Q9ULE6 856 aa18.13■□□□□ 0.49
KATNA1-201ENST00000335643 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
KATNA1-201ENST00000335643 PTPRFP10586 1907 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms