RNA–Protein interactions for RNA: ENST00000335497.11

RNF220-201, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-201ENST00000335497 G3BP1Q13283 466 aaKnown RBP eCLIP32.08■■■□□ 2.73
RNF220-201ENST00000335497 MOGSQ13724 837 aa32.08■■■□□ 2.73
RNF220-201ENST00000335497 GORABQ5T7V8 394 aa32.08■■■□□ 2.73
RNF220-201ENST00000335497 ZSCAN29Q8IWY8 852 aaPredicted RBP32.08■■■□□ 2.73
RNF220-201ENST00000335497 CLUAP1Q96AJ1 413 aa32.08■■■□□ 2.73
RNF220-201ENST00000335497 HMG20BQ9P0W2 317 aa32.08■■■□□ 2.73
RNF220-201ENST00000335497 GPR75-ASB3A0A0A6YYF3 556 aa32.07■■■□□ 2.72
RNF220-201ENST00000335497 PNMA6EA0A0J9YXQ4 647 aa32.07■■■□□ 2.72
RNF220-201ENST00000335497 PRMT2P55345 433 aa32.07■■■□□ 2.72
RNF220-201ENST00000335497 SH3BP5LQ7L8J4 393 aa32.07■■■□□ 2.72
RNF220-201ENST00000335497 SCYL3Q8IZE3 742 aa32.07■■■□□ 2.72
RNF220-201ENST00000335497 TMEM106CQ9BVX2 250 aa32.07■■■□□ 2.72
RNF220-201ENST00000335497 ARHGAP39Q9C0H5 1083 aa32.07■■■□□ 2.72
RNF220-201ENST00000335497 SPATA5Q8NB90 893 aa32.06■■■□□ 2.72
RNF220-201ENST00000335497 DDX4Q9NQI0 724 aaKnown RBP32.06■■■□□ 2.72
RNF220-201ENST00000335497 PICK1Q9NRD5 415 aa32.06■■■□□ 2.72
RNF220-201ENST00000335497 NPM3O75607 178 aaKnown RBP32.05■■■□□ 2.72
RNF220-201ENST00000335497 ARID4AP29374 1257 aaPredicted RBP32.05■■■□□ 2.72
RNF220-201ENST00000335497 ZKSCAN2Q63HK3 967 aa32.05■■■□□ 2.72
RNF220-201ENST00000335497 CPA4Q9UI42 421 aa32.05■■■□□ 2.72
RNF220-201ENST00000335497 ADGRA2Q96PE1 1338 aa32.04■■■□□ 2.72
RNF220-201ENST00000335497 DDTLA6NHG4 134 aaPredicted RBP32.04■■■□□ 2.72
RNF220-201ENST00000335497 MAP4K4O95819 1239 aaPredicted RBP32.04■■■□□ 2.72
RNF220-201ENST00000335497 RHBDL3P58872 404 aa32.04■■■□□ 2.72
RNF220-201ENST00000335497 GSTO1P78417 241 aa32.04■■■□□ 2.72
RNF220-201ENST00000335497 ZNF384Q8TF68 577 aa32.04■■■□□ 2.72
RNF220-201ENST00000335497 LDHCP07864 332 aa32.03■■■□□ 2.72
RNF220-201ENST00000335497 EN2P19622 333 aaPredicted RBP32.03■■■□□ 2.72
RNF220-201ENST00000335497 TMEM57Q8N5G2 664 aa32.03■■■□□ 2.72
RNF220-201ENST00000335497 ZHX2Q9Y6X8 837 aa32.03■■■□□ 2.72
RNF220-201ENST00000335497 ZSWIM8A7E2V4 1837 aa32.03■■■□□ 2.72
RNF220-201ENST00000335497 PTPRAP18433 802 aa32.02■■■□□ 2.72
RNF220-201ENST00000335497 PICALMQ13492 652 aa32.02■■■□□ 2.72
RNF220-201ENST00000335497 GPAT2Q6NUI2 795 aa32.02■■■□□ 2.72
RNF220-201ENST00000335497 NSUN4Q96CB9 384 aaKnown RBP32.02■■■□□ 2.72
RNF220-201ENST00000335497 PARK7Q99497 189 aaKnown RBP32.02■■■□□ 2.72
RNF220-201ENST00000335497 CTNND1O60716 968 aaKnown RBP32.01■■■□□ 2.71
RNF220-201ENST00000335497 UQCRFS1P1P0C7P4 283 aa32.01■■■□□ 2.71
RNF220-201ENST00000335497 PI16Q6UXB8 463 aa32.01■■■□□ 2.71
RNF220-201ENST00000335497 FASTKD5Q7L8L6 764 aaKnown RBP32.01■■■□□ 2.71
RNF220-201ENST00000335497 A0A0G2JLL6 359 aaPredicted RBP32■■■□□ 2.71
RNF220-201ENST00000335497 TBC1D12O60347 775 aa32■■■□□ 2.71
RNF220-201ENST00000335497 PSMC4P43686 418 aa32■■■□□ 2.71
RNF220-201ENST00000335497 POLA2Q14181 598 aa32■■■□□ 2.71
RNF220-201ENST00000335497 TBC1D9Q6ZT07 1266 aa32■■■□□ 2.71
RNF220-201ENST00000335497 PRRT2Q7Z6L0 340 aaPredicted RBP32■■■□□ 2.71
RNF220-201ENST00000335497 AFG3L2Q9Y4W6 797 aa32■■■□□ 2.71
RNF220-201ENST00000335497 HOXD10P28358 340 aa31.99■■■□□ 2.71
RNF220-201ENST00000335497 GPR108Q9NPR9 543 aa31.99■■■□□ 2.71
RNF220-201ENST00000335497 CTGFP29279 349 aa31.98■■■□□ 2.71
RNF220-201ENST00000335497 MCAMP43121 646 aa31.98■■■□□ 2.71
RNF220-201ENST00000335497 SLC4A8Q2Y0W8 1093 aa31.98■■■□□ 2.71
RNF220-201ENST00000335497 TRIM47Q96LD4 638 aa31.98■■■□□ 2.71
RNF220-201ENST00000335497 RAI14Q9P0K7 980 aa31.98■■■□□ 2.71
RNF220-201ENST00000335497 SRRDQ9UH36 339 aa31.98■■■□□ 2.71
RNF220-201ENST00000335497 DOCK1Q14185 1865 aa31.97■■■□□ 2.71
RNF220-201ENST00000335497 SSH3Q8TE77 659 aa31.97■■■□□ 2.71
RNF220-201ENST00000335497 SH3TC2Q8TF17 1288 aa31.97■■■□□ 2.71
RNF220-201ENST00000335497 SLC45A1Q9Y2W3 748 aa31.97■■■□□ 2.71
RNF220-201ENST00000335497 COL2A1P02458 1487 aaPredicted RBP31.97■■■□□ 2.71
RNF220-201ENST00000335497 SLURP2P0DP57 97 aa31.96■■■□□ 2.71
RNF220-201ENST00000335497 BCRP11274 1271 aa31.96■■■□□ 2.71
RNF220-201ENST00000335497 ATP8B2P98198 1209 aa31.96■■■□□ 2.71
RNF220-201ENST00000335497 LRP2BPQ9P2M1 347 aa31.96■■■□□ 2.71
RNF220-201ENST00000335497 FMNL1O95466 1100 aaPredicted RBP31.95■■■□□ 2.71
RNF220-201ENST00000335497 CYP2C8P10632 490 aa31.95■■■□□ 2.71
RNF220-201ENST00000335497 OSBPP22059 807 aa31.94■■■□□ 2.7
RNF220-201ENST00000335497 HNRNPUQ00839 825 aaKnown RBP eCLIP31.94■■■□□ 2.7
RNF220-201ENST00000335497 TNNI3KQ59H18 835 aa31.94■■■□□ 2.7
RNF220-201ENST00000335497 FPGT-TNNI3KV9GXZ4 949 aa31.94■■■□□ 2.7
RNF220-201ENST00000335497 OS9Q13438 667 aaPredicted RBP31.93■■■□□ 2.7
RNF220-201ENST00000335497 GADL1Q6ZQY3 521 aa31.93■■■□□ 2.7
RNF220-201ENST00000335497 GCC1Q96CN9 775 aa31.93■■■□□ 2.7
RNF220-201ENST00000335497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.93■■■□□ 2.7
RNF220-201ENST00000335497 PHIPQ8WWQ0 1821 aa31.93■■■□□ 2.7
RNF220-201ENST00000335497 PTPRFP10586 1907 aa31.92■■■□□ 2.7
RNF220-201ENST00000335497 ECM2O94769 699 aaPredicted RBP31.92■■■□□ 2.7
RNF220-201ENST00000335497 CCDC158Q5M9N0 1113 aa31.92■■■□□ 2.7
RNF220-201ENST00000335497 TTC39AQ5SRH9 613 aa31.92■■■□□ 2.7
RNF220-201ENST00000335497 FTSJ3Q8IY81 847 aaKnown RBP31.92■■■□□ 2.7
RNF220-201ENST00000335497 OSBPL5Q9H0X9 879 aaPredicted RBP31.92■■■□□ 2.7
RNF220-201ENST00000335497 RAET1EQ8TD07 263 aa31.91■■■□□ 2.7
RNF220-201ENST00000335497 MYPNQ86TC9 1320 aa31.91■■■□□ 2.7
RNF220-201ENST00000335497 IGSF3O75054 1194 aa31.9■■■□□ 2.7
RNF220-201ENST00000335497 SURF6O75683 361 aaKnown RBP31.9■■■□□ 2.7
RNF220-201ENST00000335497 MYCP01106 439 aaPredicted RBP31.9■■■□□ 2.7
RNF220-201ENST00000335497 FCGRTP55899 365 aa31.9■■■□□ 2.7
RNF220-201ENST00000335497 TEX11Q8IYF3 940 aa31.9■■■□□ 2.7
RNF220-201ENST00000335497 ZNF512BQ96KM6 892 aaPredicted RBP31.9■■■□□ 2.7
RNF220-201ENST00000335497 DBNDD2Q9BQY9 259 aa31.9■■■□□ 2.7
RNF220-201ENST00000335497 NOL10Q9BSC4 688 aaKnown RBP31.9■■■□□ 2.7
RNF220-201ENST00000335497 NOP58Q9Y2X3 529 aaKnown RBP31.9■■■□□ 2.7
RNF220-201ENST00000335497 TRIM75PA6NK02 468 aa31.89■■■□□ 2.7
RNF220-201ENST00000335497 NAA16Q6N069 864 aaPredicted RBP31.89■■■□□ 2.7
RNF220-201ENST00000335497 SNRKQ9NRH2 765 aa31.89■■■□□ 2.7
RNF220-201ENST00000335497 ZBTB7BO15156 539 aaPredicted RBP31.88■■■□□ 2.69
RNF220-201ENST00000335497 BAG3O95817 575 aa31.88■■■□□ 2.69
RNF220-201ENST00000335497 GRK4P32298 578 aa31.88■■■□□ 2.69
RNF220-201ENST00000335497 MIER1Q8N108 512 aa31.88■■■□□ 2.69
RNF220-201ENST00000335497 TBC1D2Q9BYX2 928 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms