RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.31
C9orf47-201ENST00000334490 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.31
C9orf47-201ENST00000334490 KIF18AQ8NI77 898 aa17.02■□□□□ 0.31
C9orf47-201ENST00000334490 CLTCL1P53675 1640 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 HSPA4P34932 840 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 BTDP43251 543 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 CSADQ9Y600 493 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 CHMP2AO43633 222 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 USH1GQ495M9 461 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 FAM200AQ8TCP9 573 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 MYCLP12524 364 aaPredicted RBP17.01■□□□□ 0.31
C9orf47-201ENST00000334490 CTAGE1Q96RT6 745 aa17.01■□□□□ 0.31
C9orf47-201ENST00000334490 DBNLQ9UJU6 430 aaKnown RBP17.01■□□□□ 0.31
C9orf47-201ENST00000334490 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
C9orf47-201ENST00000334490 TMCO5BA8MYB1 307 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 CIAO1O76071 339 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 PAFAH1B1P43034 410 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 IRX3P78415 501 aaPredicted RBP17■□□□□ 0.31
C9orf47-201ENST00000334490 UVSSAQ2YD98 709 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
C9orf47-201ENST00000334490 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 CTNNBL1Q8WYA6 563 aaPredicted RBP17■□□□□ 0.31
C9orf47-201ENST00000334490 STX17P56962 302 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 ATL3Q6DD88 541 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 ALKQ9UM73 1620 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 DTNBO60941 627 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 CFBP00751 764 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 GOPCQ9HD26 462 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 CCDC172P0C7W6 258 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 TMC4Q7Z404 712 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 LZTS2Q9BRK4 669 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 IMPG2Q9BZV3 1241 aa17■□□□□ 0.31
C9orf47-201ENST00000334490 A0A1B0GVL5 298 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 MMP10P09238 476 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 FAM212AQ96EL1 285 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 HSPD1P10809 573 aaKnown RBP16.99■□□□□ 0.31
C9orf47-201ENST00000334490 ADCY7P51828 1080 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
C9orf47-201ENST00000334490 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 GSPT1P15170 499 aaKnown RBP16.99■□□□□ 0.31
C9orf47-201ENST00000334490 CCT6AP40227 531 aaKnown RBP16.99■□□□□ 0.31
C9orf47-201ENST00000334490 TXKP42681 527 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 FAM193AP78312 1265 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 FAM173BQ6P4H8 233 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 LUZP1Q86V48 1076 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
C9orf47-201ENST00000334490 CASQ1P31415 396 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 MTERF4Q7Z6M4 381 aaKnown RBP16.99■□□□□ 0.31
C9orf47-201ENST00000334490 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
C9orf47-201ENST00000334490 CTNNA2P26232 953 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 ARID4AP29374 1257 aaPredicted RBP16.98■□□□□ 0.31
C9orf47-201ENST00000334490 NONOQ15233 471 aaKnown RBP eCLIP16.98■□□□□ 0.31
C9orf47-201ENST00000334490 TMX1Q9H3N1 280 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 ANO1Q5XXA6 986 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 ABCA9Q8IUA7 1624 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 DCAF15Q66K64 600 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 SV2BQ7L1I2 683 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 TAX1BP1Q86VP1 789 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 ZNF654Q8IZM8 581 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 FNBP4Q8N3X1 1017 aaPredicted RBP16.98■□□□□ 0.31
C9orf47-201ENST00000334490 KIFC2Q96AC6 838 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 DBNDD1Q9H9R9 158 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 ANKRD62A6NC57 917 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 FGAP02671 866 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 CA8P35219 290 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 PLCD1P51178 756 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 PTH1RQ03431 593 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 ALS2CR12Q96Q35 445 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
C9orf47-201ENST00000334490 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
C9orf47-201ENST00000334490 SUSD4Q5VX71 490 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 KRT40Q6A162 431 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 CHURC1Q8WUH1 139 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 TM6SF1Q9BZW5 370 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
C9orf47-201ENST00000334490 CDC42BPGQ6DT37 1551 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
C9orf47-201ENST00000334490 UBE3CQ15386 1083 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 TTC38Q5R3I4 469 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 TAF3Q5VWG9 929 aa16.97■□□□□ 0.31
C9orf47-201ENST00000334490 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
C9orf47-201ENST00000334490 TYRO3Q06418 890 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 CERKLQ49MI3 558 aaPredicted RBP16.96■□□□□ 0.31
C9orf47-201ENST00000334490 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 SYNCQ9H7C4 482 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 BICDL2A1A5D9 508 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 C16orf45Q96MC5 204 aaPredicted RBP16.96■□□□□ 0.31
C9orf47-201ENST00000334490 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 EIF3JO75822 258 aaKnown RBP16.96■□□□□ 0.31
C9orf47-201ENST00000334490 RBM6P78332 1123 aaKnown RBP16.96■□□□□ 0.31
C9orf47-201ENST00000334490 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 CCDC65Q8IXS2 484 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 GTPBP4Q9BZE4 634 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms