RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 EP400Q96L91 3159 aa22.06■■□□□ 1.12
LAMP1-201ENST00000332556 BECN2A8MW95 431 aa22.06■■□□□ 1.12
LAMP1-201ENST00000332556 MAP3K12Q12852 859 aa22.06■■□□□ 1.12
LAMP1-201ENST00000332556 VPS37DQ86XT2 251 aa22.06■■□□□ 1.12
LAMP1-201ENST00000332556 MYH15Q9Y2K3 1946 aa22.06■■□□□ 1.12
LAMP1-201ENST00000332556 MROH5Q6ZUA9 1318 aa22.06■■□□□ 1.12
LAMP1-201ENST00000332556 MYH14Q7Z406 1995 aaKnown RBP22.06■■□□□ 1.12
LAMP1-201ENST00000332556 ZBTB43O43298 467 aa22.05■■□□□ 1.12
LAMP1-201ENST00000332556 KLRK1P26718 216 aa22.05■■□□□ 1.12
LAMP1-201ENST00000332556 DHX40Q8IX18 779 aaKnown RBP22.05■■□□□ 1.12
LAMP1-201ENST00000332556 NUP133Q8WUM0 1156 aa22.05■■□□□ 1.12
LAMP1-201ENST00000332556 DHX16O60231 1041 aaKnown RBP22.05■■□□□ 1.12
LAMP1-201ENST00000332556 PRDM1O75626 825 aa22.05■■□□□ 1.12
LAMP1-201ENST00000332556 NTSR2O95665 410 aa22.05■■□□□ 1.12
LAMP1-201ENST00000332556 UQCRFS1P1P0C7P4 283 aa22.05■■□□□ 1.12
LAMP1-201ENST00000332556 IGHMBP2P38935 993 aaKnown RBP22.05■■□□□ 1.12
LAMP1-201ENST00000332556 FAM98CQ17RN3 349 aaKnown RBP22.05■■□□□ 1.12
LAMP1-201ENST00000332556 SPATA31A1Q5TZJ5 1347 aa22.05■■□□□ 1.12
LAMP1-201ENST00000332556 SKILP12757 684 aa22.04■■□□□ 1.12
LAMP1-201ENST00000332556 STX1AQ16623 288 aa22.04■■□□□ 1.12
LAMP1-201ENST00000332556 ZMYM6O95789 1325 aa22.04■■□□□ 1.12
LAMP1-201ENST00000332556 PATL2C9JE40 543 aaKnown RBP22.04■■□□□ 1.12
LAMP1-201ENST00000332556 ANO1Q5XXA6 986 aa22.04■■□□□ 1.12
LAMP1-201ENST00000332556 OGFRQ9NZT2 677 aa22.04■■□□□ 1.12
LAMP1-201ENST00000332556 PAXBP1Q9Y5B6 917 aa22.04■■□□□ 1.12
LAMP1-201ENST00000332556 DYNLL1P63167 89 aaKnown RBP22.03■■□□□ 1.12
LAMP1-201ENST00000332556 ADALQ6DHV7 355 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 FEZ1Q99689 392 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 RAI14Q9P0K7 980 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 ZNF215Q9UL58 517 aaPredicted RBP22.03■■□□□ 1.12
LAMP1-201ENST00000332556 ROBO1Q9Y6N7 1651 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 CYP7A1P22680 504 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 COL16A1Q07092 1604 aaPredicted RBP22.03■■□□□ 1.12
LAMP1-201ENST00000332556 CCDC69A6NI79 296 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 NPHP1O15259 732 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 PFKFB1P16118 471 aa22.03■■□□□ 1.12
LAMP1-201ENST00000332556 ZNF202O95125 648 aa22.02■■□□□ 1.12
LAMP1-201ENST00000332556 IARSP41252 1262 aaKnown RBP22.02■■□□□ 1.12
LAMP1-201ENST00000332556 HSP90AA4PQ58FG1 418 aa22.02■■□□□ 1.12
LAMP1-201ENST00000332556 SLC12A7Q9Y666 1083 aa22.02■■□□□ 1.12
LAMP1-201ENST00000332556 ANKRD36CQ5JPF3 1778 aa22.02■■□□□ 1.12
LAMP1-201ENST00000332556 NTRK3Q16288 839 aa22.02■■□□□ 1.11
LAMP1-201ENST00000332556 MFSD6Q6ZSS7 791 aa22.02■■□□□ 1.11
LAMP1-201ENST00000332556 ZNF771Q7L3S4 317 aaPredicted RBP22.02■■□□□ 1.11
LAMP1-201ENST00000332556 FBXL16Q8N461 479 aa22.02■■□□□ 1.11
LAMP1-201ENST00000332556 GRIN1Q05586 938 aa22.01■■□□□ 1.11
LAMP1-201ENST00000332556 PTPN14Q15678 1187 aa22.01■■□□□ 1.11
LAMP1-201ENST00000332556 LINC00116Q8NCU8 138 aa22.01■■□□□ 1.11
LAMP1-201ENST00000332556 ZNF512BQ96KM6 892 aaPredicted RBP22.01■■□□□ 1.11
LAMP1-201ENST00000332556 SRP68Q9UHB9 627 aaKnown RBP22.01■■□□□ 1.11
LAMP1-201ENST00000332556 AXDND1Q5T1B0 1012 aaPredicted RBP22.01■■□□□ 1.11
LAMP1-201ENST00000332556 CELF1Q92879 486 aaKnown RBP22.01■■□□□ 1.11
LAMP1-201ENST00000332556 BTBD18B2RXH4 712 aa22■■□□□ 1.11
LAMP1-201ENST00000332556 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
LAMP1-201ENST00000332556 CGNQ9P2M7 1197 aaKnown RBP22■■□□□ 1.11
LAMP1-201ENST00000332556 KIF20AO95235 890 aa22■■□□□ 1.11
LAMP1-201ENST00000332556 CDC25BP30305 580 aa22■■□□□ 1.11
LAMP1-201ENST00000332556 AKNAD1Q5T1N1 836 aa22■■□□□ 1.11
LAMP1-201ENST00000332556 TFCP2L1Q9NZI6 479 aa22■■□□□ 1.11
LAMP1-201ENST00000332556 FOXN1O15353 648 aa21.99■■□□□ 1.11
LAMP1-201ENST00000332556 NR5A1Q13285 461 aa21.99■■□□□ 1.11
LAMP1-201ENST00000332556 POLR3EQ9NVU0 708 aa21.99■■□□□ 1.11
LAMP1-201ENST00000332556 DDX41Q9UJV9 622 aaKnown RBP21.99■■□□□ 1.11
LAMP1-201ENST00000332556 ABCC12Q96J65 1359 aa21.99■■□□□ 1.11
LAMP1-201ENST00000332556 CCZ1BP86790 482 aa21.99■■□□□ 1.11
LAMP1-201ENST00000332556 CCZ1P86791 482 aaPredicted RBP21.99■■□□□ 1.11
LAMP1-201ENST00000332556 MRFAP1L1Q96HT8 127 aa21.99■■□□□ 1.11
LAMP1-201ENST00000332556 COL14A1Q05707 1796 aaKnown RBP21.98■■□□□ 1.11
LAMP1-201ENST00000332556 KMT5BQ4FZB7 885 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 SARM1Q6SZW1 724 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 KIF18AQ8NI77 898 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 C4AP0C0L4 1744 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 C4BP0C0L5 1744 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 BAZ2BQ9UIF8 2168 aaKnown RBP21.98■■□□□ 1.11
LAMP1-201ENST00000332556 PNOCQ13519 176 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 SYCP1Q15431 976 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 SHC4Q6S5L8 630 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 KIAA1468Q9P260 1216 aa21.98■■□□□ 1.11
LAMP1-201ENST00000332556 ELF2Q15723 593 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 AMIGO3Q86WK7 504 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 KCNG4Q8TDN1 519 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 OXER1Q8TDS5 423 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 ANO10Q9NW15 660 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 FAM205CA6NFA0 338 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 RBM6P78332 1123 aaKnown RBP21.97■■□□□ 1.11
LAMP1-201ENST00000332556 TBC1D9BQ66K14 1250 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 NYAP1Q6ZVC0 841 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 ATRNO75882 1429 aa21.97■■□□□ 1.11
LAMP1-201ENST00000332556 SLC3A2P08195 630 aaKnown RBP21.96■■□□□ 1.11
LAMP1-201ENST00000332556 CTAGE5O15320 804 aa21.96■■□□□ 1.11
LAMP1-201ENST00000332556 BRAPQ7Z569 592 aa21.96■■□□□ 1.11
LAMP1-201ENST00000332556 CEP57L1Q8IYX8 460 aa21.96■■□□□ 1.11
LAMP1-201ENST00000332556 CAVIN2O95810 425 aa21.95■■□□□ 1.1
LAMP1-201ENST00000332556 LMOD1P29536 600 aaPredicted RBP21.95■■□□□ 1.1
LAMP1-201ENST00000332556 SSRP1Q08945 709 aaKnown RBP21.95■■□□□ 1.1
LAMP1-201ENST00000332556 WTAPQ15007 396 aa21.95■■□□□ 1.1
LAMP1-201ENST00000332556 ZRSR1Q15695 479 aaKnown RBP21.95■■□□□ 1.1
LAMP1-201ENST00000332556 TICAM2Q86XR7 235 aa21.95■■□□□ 1.1
LAMP1-201ENST00000332556 SMC2O95347 1197 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms