RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 STK38Q15208 465 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 TPTE2Q6XPS3 522 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 LUZP1Q86V48 1076 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 KCNG4Q8TDN1 519 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 RNF41Q9H4P4 317 aaPredicted RBP20.24■□□□□ 0.83
DDX28-201ENST00000332395 CBX8Q9HC52 389 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 ECM29Q5VYK3 1845 aa20.24■□□□□ 0.83
DDX28-201ENST00000332395 RANBP6O60518 1105 aaKnown RBP20.23■□□□□ 0.83
DDX28-201ENST00000332395 KINO60870 393 aaKnown RBP20.23■□□□□ 0.83
DDX28-201ENST00000332395 SART3Q15020 963 aaKnown RBP20.23■□□□□ 0.83
DDX28-201ENST00000332395 FBXO33Q7Z6M2 555 aa20.23■□□□□ 0.83
DDX28-201ENST00000332395 CCDC24Q8N4L8 307 aa20.23■□□□□ 0.83
DDX28-201ENST00000332395 ARHGEF1Q92888 912 aaKnown RBP20.23■□□□□ 0.83
DDX28-201ENST00000332395 RIOK1Q9BRS2 568 aaKnown RBP20.23■□□□□ 0.83
DDX28-201ENST00000332395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.23■□□□□ 0.83
DDX28-201ENST00000332395 NID2Q14112 1375 aa20.23■□□□□ 0.83
DDX28-201ENST00000332395 KLRK1P26718 216 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 SF3A1Q15459 793 aaKnown RBP20.22■□□□□ 0.83
DDX28-201ENST00000332395 SYNE3Q6ZMZ3 975 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 STK11IPQ8N1F8 1099 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 MRPS27Q92552 414 aaKnown RBP20.22■□□□□ 0.83
DDX28-201ENST00000332395 TAF1LQ8IZX4 1826 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 A0A1W2PQ27 194 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 A0A1W2PQ64 194 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 A0A1W2PQD8 194 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 SEMA3EO15041 775 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 KRT40Q6A162 431 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 ZKSCAN3Q9BRR0 538 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 MTA3Q9BTC8 594 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 LY75O60449 1722 aa20.22■□□□□ 0.83
DDX28-201ENST00000332395 WTAPQ15007 396 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 MPNDQ8N594 471 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 ANKRD2Q9GZV1 360 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 DNAJC25Q9H1X3 360 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 ANAPC4Q9UJX5 808 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 STK36Q9NRP7 1315 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 ERICH2A1L162 156 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 MINDY4BA8MYZ0 360 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 SPTLC2O15270 562 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 ZNF384Q8TF68 577 aa20.21■□□□□ 0.83
DDX28-201ENST00000332395 ZNF165P49910 485 aa20.2■□□□□ 0.82
DDX28-201ENST00000332395 ANO1Q5XXA6 986 aa20.2■□□□□ 0.82
DDX28-201ENST00000332395 CAVIN2O95810 425 aa20.19■□□□□ 0.82
DDX28-201ENST00000332395 DYNLL1P63167 89 aaKnown RBP20.19■□□□□ 0.82
DDX28-201ENST00000332395 SSRP1Q08945 709 aaKnown RBP20.19■□□□□ 0.82
DDX28-201ENST00000332395 FMR1NBQ8N0W7 255 aaPredicted RBP20.19■□□□□ 0.82
DDX28-201ENST00000332395 SLC26A6Q9BXS9 759 aa20.19■□□□□ 0.82
DDX28-201ENST00000332395 MYH13Q9UKX3 1938 aa20.19■□□□□ 0.82
DDX28-201ENST00000332395 FMNL1O95466 1100 aaPredicted RBP20.19■□□□□ 0.82
DDX28-201ENST00000332395 IFNAR1P17181 557 aa20.19■□□□□ 0.82
DDX28-201ENST00000332395 TRIM29Q14134 588 aa20.19■□□□□ 0.82
DDX28-201ENST00000332395 TMTC2Q8N394 836 aa20.19■□□□□ 0.82
DDX28-201ENST00000332395 TAOK2Q9UL54 1235 aa20.19■□□□□ 0.82
DDX28-201ENST00000332395 PDS5AQ29RF7 1337 aaKnown RBP20.19■□□□□ 0.82
DDX28-201ENST00000332395 A0A1B0GVL5 298 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 TM4SF1P30408 202 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 HIBADHP31937 336 aaKnown RBP20.18■□□□□ 0.82
DDX28-201ENST00000332395 RTN1Q16799 776 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 TDRD7Q8NHU6 1098 aaKnown RBP20.18■□□□□ 0.82
DDX28-201ENST00000332395 UBAC1Q9BSL1 405 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 BRIP1Q9BX63 1249 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 TFCP2L1Q9NZI6 479 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 UBE2Q2LH0YL09 131 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 RFC4P35249 363 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 NDUFA8P51970 172 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 GNL2Q13823 731 aaKnown RBP20.18■□□□□ 0.82
DDX28-201ENST00000332395 ESR2Q92731 530 aa20.18■□□□□ 0.82
DDX28-201ENST00000332395 NSUN4Q96CB9 384 aaKnown RBP20.18■□□□□ 0.82
DDX28-201ENST00000332395 GJD4Q96KN9 370 aaPredicted RBP20.18■□□□□ 0.82
DDX28-201ENST00000332395 ZNF830Q96NB3 372 aaPredicted RBP20.18■□□□□ 0.82
DDX28-201ENST00000332395 SBF2Q86WG5 1849 aa20.17■□□□□ 0.82
DDX28-201ENST00000332395 TNRC6CQ9HCJ0 1690 aaKnown RBP20.17■□□□□ 0.82
DDX28-201ENST00000332395 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
DDX28-201ENST00000332395 NPHP1O15259 732 aa20.17■□□□□ 0.82
DDX28-201ENST00000332395 STX1AQ16623 288 aa20.17■□□□□ 0.82
DDX28-201ENST00000332395 BAZ2AQ9UIF9 1905 aaKnown RBP20.17■□□□□ 0.82
DDX28-201ENST00000332395 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.82
DDX28-201ENST00000332395 RCAN1P53805 252 aa20.17■□□□□ 0.82
DDX28-201ENST00000332395 WASF1Q92558 559 aa20.17■□□□□ 0.82
DDX28-201ENST00000332395 DUOX1Q9NRD9 1551 aa20.16■□□□□ 0.82
DDX28-201ENST00000332395 MECOMQ03112 1051 aa20.16■□□□□ 0.82
DDX28-201ENST00000332395 KIAA2012Q0VF49 1180 aa20.16■□□□□ 0.82
DDX28-201ENST00000332395 SLC39A14Q15043 492 aa20.16■□□□□ 0.82
DDX28-201ENST00000332395 TRAPPC3LQ5T215 181 aa20.16■□□□□ 0.82
DDX28-201ENST00000332395 ZNF654Q8IZM8 581 aa20.16■□□□□ 0.82
DDX28-201ENST00000332395 TTC12Q9H892 705 aaPredicted RBP20.16■□□□□ 0.82
DDX28-201ENST00000332395 TNKSO95271 1327 aa20.15■□□□□ 0.82
DDX28-201ENST00000332395 AXDND1Q5T1B0 1012 aaPredicted RBP20.15■□□□□ 0.82
DDX28-201ENST00000332395 TRIM22Q8IYM9 498 aa20.15■□□□□ 0.82
DDX28-201ENST00000332395 CYP2D7A0A087X1C5 515 aa20.15■□□□□ 0.82
DDX28-201ENST00000332395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.15■□□□□ 0.82
DDX28-201ENST00000332395 CCDC196A0A1B0GTZ2 297 aa20.15■□□□□ 0.82
DDX28-201ENST00000332395 SEC23AQ15436 765 aa20.15■□□□□ 0.82
DDX28-201ENST00000332395 C11orf57Q6ZUT1 292 aaPredicted RBP20.15■□□□□ 0.82
DDX28-201ENST00000332395 SDF4Q9BRK5 362 aa20.15■□□□□ 0.82
DDX28-201ENST00000332395 GUCY1A2P33402 732 aa20.14■□□□□ 0.81
DDX28-201ENST00000332395 CHAF1AQ13111 956 aaPredicted RBP20.14■□□□□ 0.81
DDX28-201ENST00000332395 MEX3CQ5U5Q3 659 aaKnown RBP20.14■□□□□ 0.81
DDX28-201ENST00000332395 NBPF11Q86T75 865 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms