RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 KLHDC4Q8TBB5 520 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
CLN8-201ENST00000331222 NEMFO60524 1076 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 CAPN2P17655 700 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 PDE4DQ08499 809 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 Q3C1V9 767 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 GKAP1Q5VSY0 366 aaPredicted RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 KIFAP3Q92845 792 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 BICDL2A1A5D9 508 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 KRT86O43790 486 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 GTF2A1P52655 376 aaPredicted RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 PDE1CQ14123 709 aaPredicted RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 CFBP00751 764 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 MYCT1Q8N699 235 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 GOLGA6CA6NDK9 693 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 GOLGA6BA6NDN3 693 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 GOLGA6DP0CG33 693 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 SMTNP53814 917 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 AK2P54819 239 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 GOLGA6AQ9NYA3 693 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 FRMPD2Q68DX3 1309 aaPredicted RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 M0QZ92 97 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 DYNC1I1O14576 645 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 SARNPP82979 210 aaKnown RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 CREB3L3Q68CJ9 461 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 TNNQ9UQP3 1299 aa11.82□□□□□ -0.52
CLN8-201ENST00000331222 POLR2DO15514 142 aaKnown RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 RIOK1Q9BRS2 568 aaKnown RBP11.82□□□□□ -0.52
CLN8-201ENST00000331222 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
CLN8-201ENST00000331222 GNA11P29992 359 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 GNL1P36915 607 aaPredicted RBP11.81□□□□□ -0.52
CLN8-201ENST00000331222 IGBP1P78318 339 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 CMTR1Q8N1G2 835 aaKnown RBP11.81□□□□□ -0.52
CLN8-201ENST00000331222 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 H0YIN7 160 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 NELFCDQ8IXH7 590 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 ABCF3Q9NUQ8 709 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 IRAK4Q9NWZ3 460 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 ARHGEF35A5YM69 484 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 PAXBP1Q9Y5B6 917 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 RNF113AO15541 343 aaKnown RBP11.81□□□□□ -0.52
CLN8-201ENST00000331222 ARHGAP44Q17R89 818 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 MRPL44Q9H9J2 332 aaKnown RBP11.81□□□□□ -0.52
CLN8-201ENST00000331222 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 BCS1LQ9Y276 419 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 OPA1O60313 960 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 SLC4A1P02730 911 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 NUCB1Q02818 461 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 NSMFQ6X4W1 530 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 EYA3Q99504 573 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 NCOA5Q9HCD5 579 aaKnown RBP11.81□□□□□ -0.52
CLN8-201ENST00000331222 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
CLN8-201ENST00000331222 PDE1AP54750 535 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 KRT83P78385 493 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 ARHGAP27Q6ZUM4 889 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 SDCCAG8Q86SQ7 713 aaPredicted RBP11.8□□□□□ -0.52
CLN8-201ENST00000331222 STAMQ92783 540 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 APOL6Q9BWW8 343 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 STMN4Q9H169 189 aaPredicted RBP11.8□□□□□ -0.52
CLN8-201ENST00000331222 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 ANKFY1Q9P2R3 1169 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 CCDC171Q6TFL3 1326 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
CLN8-201ENST00000331222 CAPN12Q6ZSI9 719 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 ARHGEF2Q92974 986 aaKnown RBP11.8□□□□□ -0.52
CLN8-201ENST00000331222 TXNDC9O14530 226 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 APBA3O96018 575 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 ITGA6P23229 1130 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 TYRO3Q06418 890 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 ASIC2Q16515 512 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 SH2D4BQ5SQS7 431 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 SCYL2Q6P3W7 929 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 KIAA1524Q8TCG1 905 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 DPP8Q6V1X1 898 aaPredicted RBP11.8□□□□□ -0.52
CLN8-201ENST00000331222 INTS8Q75QN2 995 aaKnown RBP11.8□□□□□ -0.52
CLN8-201ENST00000331222 CHMP6Q96FZ7 201 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 PHKBQ93100 1093 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 MTUS1Q9ULD2 1270 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 PLCG2P16885 1265 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 PPFIA1Q13136 1202 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 POLKQ9UBT6 870 aa11.8□□□□□ -0.52
CLN8-201ENST00000331222 STK25O00506 426 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 TBC1D8O95759 1140 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 CD19P15391 556 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 KIF9Q9HAQ2 790 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 MTRF1LQ9UGC7 380 aaKnown RBP11.79□□□□□ -0.52
CLN8-201ENST00000331222 FAM47AQ5JRC9 791 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 DCUN1D2Q6PH85 259 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 TPH2Q8IWU9 490 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 STMN2Q93045 179 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 MMS19Q96T76 1030 aa11.79□□□□□ -0.52
CLN8-201ENST00000331222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLN8-201ENST00000331222 CALCOCO2Q13137 446 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms