RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 SYNGAP1Q96PV0 1343 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 ADAMTS4O75173 837 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 SLFN14P0C7P3 912 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 DAB2P98082 770 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 FGD1P98174 961 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 ID3Q02535 119 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 C9orf131Q5VYM1 1079 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 SEZ6L2Q6UXD5 910 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 TMC4Q7Z404 712 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 ZAR1Q86SH2 424 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 YIPF2Q9BWQ6 316 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 C1GALT1Q9NS00 363 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 PPM1HQ9ULR3 514 aa6.46□□□□□ -1.38
SKP1-201ENST00000328392 RECKO95980 971 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 EIF4BP23588 611 aaKnown RBP6.45□□□□□ -1.38
SKP1-201ENST00000328392 MAP7Q14244 749 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 TTLL4Q14679 1199 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 NBPF11Q86T75 865 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 TMEM87AQ8NBN3 555 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 OSBPL1AQ9BXW6 950 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 CEP44Q9C0F1 390 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 ATG3Q9NT62 314 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 CACNA2D2Q9NY47 1150 aa6.45□□□□□ -1.38
SKP1-201ENST00000328392 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
SKP1-201ENST00000328392 NEFMP07197 916 aa6.44□□□□□ -1.38
SKP1-201ENST00000328392 HCLS1P14317 486 aaPredicted RBP6.44□□□□□ -1.38
SKP1-201ENST00000328392 ZC3H12AQ5D1E8 599 aaKnown RBP6.44□□□□□ -1.38
SKP1-201ENST00000328392 EMILIN2Q9BXX0 1053 aa6.44□□□□□ -1.38
SKP1-201ENST00000328392 PIM2Q9P1W9 311 aa6.44□□□□□ -1.38
SKP1-201ENST00000328392 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
SKP1-201ENST00000328392 AK5Q9Y6K8 562 aa6.44□□□□□ -1.38
SKP1-201ENST00000328392 SPINK2P20155 84 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 PTPN11Q06124 597 aaPredicted RBP6.43□□□□□ -1.38
SKP1-201ENST00000328392 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 MRPL58Q14197 206 aaKnown RBP6.43□□□□□ -1.38
SKP1-201ENST00000328392 PCNX4Q63HM2 1172 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 ANKRD24Q8TF21 1146 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 ACSBG1Q96GR2 724 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 FRMD6Q96NE9 622 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 ATXN3LQ9H3M9 355 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 PIDD1Q9HB75 910 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 LEMD3Q9Y2U8 911 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 CSADQ9Y600 493 aa6.43□□□□□ -1.38
SKP1-201ENST00000328392 DCDC2CA8MYV0 355 aa6.42□□□□□ -1.38
SKP1-201ENST00000328392 RNGTTO60942 597 aaKnown RBP6.42□□□□□ -1.38
SKP1-201ENST00000328392 CTSHP09668 335 aa6.42□□□□□ -1.38
SKP1-201ENST00000328392 GRIK1P39086 918 aa6.42□□□□□ -1.38
SKP1-201ENST00000328392 MEI1Q5TIA1 1274 aa6.42□□□□□ -1.38
SKP1-201ENST00000328392 LLGL2Q6P1M3 1020 aa6.42□□□□□ -1.38
SKP1-201ENST00000328392 INTS5Q6P9B9 1019 aaKnown RBP6.42□□□□□ -1.38
SKP1-201ENST00000328392 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
SKP1-201ENST00000328392 FOSL1P15407 271 aa6.41□□□□□ -1.38
SKP1-201ENST00000328392 PPM1JQ5JR12 505 aa6.41□□□□□ -1.38
SKP1-201ENST00000328392 C12orf40Q86WS4 652 aa6.41□□□□□ -1.38
SKP1-201ENST00000328392 DTX1Q86Y01 620 aa6.41□□□□□ -1.38
SKP1-201ENST00000328392 GIMAP7Q8NHV1 300 aa6.41□□□□□ -1.38
SKP1-201ENST00000328392 ISL2Q96A47 359 aa6.41□□□□□ -1.38
SKP1-201ENST00000328392 SAMM50Q9Y512 469 aa6.41□□□□□ -1.38
SKP1-201ENST00000328392 F6X3S4 739 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 CYP26A1O43174 497 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 TRIM37O94972 964 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 TCF3P15923 654 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 NTF4P34130 210 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 MSMPQ1L6U9 139 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 LDLRAD1Q5T700 205 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 SV2BQ7L1I2 683 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 UBE3DQ7Z6J8 389 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 LRRC4CQ9HCJ2 640 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 PCDHA4Q9UN74 947 aa6.4□□□□□ -1.38
SKP1-201ENST00000328392 LEFTY1O75610 366 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 CDK8P49336 464 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 ERVK-24P63145 666 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 INPP5AQ14642 412 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 LRRC14Q15048 493 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 CCDC85BQ15834 202 aaPredicted RBP6.39□□□□□ -1.39
SKP1-201ENST00000328392 MAP3K11Q16584 847 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 TTBK2Q6IQ55 1244 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 OGFOD3Q6PK18 319 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.39□□□□□ -1.39
SKP1-201ENST00000328392 RNF214Q8ND24 703 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 CRELD1Q96HD1 420 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 METTL22Q9BUU2 404 aaPredicted RBP6.39□□□□□ -1.39
SKP1-201ENST00000328392 PCOLCE2Q9UKZ9 415 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 CYP8B1Q9UNU6 501 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 PCDHB5Q9Y5E4 795 aa6.39□□□□□ -1.39
SKP1-201ENST00000328392 SCAMP3O14828 347 aaKnown RBP6.38□□□□□ -1.39
SKP1-201ENST00000328392 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
SKP1-201ENST00000328392 VAMP1P23763 118 aa6.38□□□□□ -1.39
SKP1-201ENST00000328392 RING1Q06587 406 aa6.38□□□□□ -1.39
SKP1-201ENST00000328392 LRFN4Q6PJG9 635 aa6.38□□□□□ -1.39
SKP1-201ENST00000328392 GAL3ST3Q96A11 431 aa6.38□□□□□ -1.39
SKP1-201ENST00000328392 PSMG3-AS1Q96PY0 264 aa6.38□□□□□ -1.39
SKP1-201ENST00000328392 SSU72Q9NP77 194 aaKnown RBP6.38□□□□□ -1.39
SKP1-201ENST00000328392 ZC3H7BQ9UGR2 993 aaKnown RBP6.38□□□□□ -1.39
SKP1-201ENST00000328392 U3KQE9 123 aa6.38□□□□□ -1.39
SKP1-201ENST00000328392 ZNF76P36508 570 aa6.37□□□□□ -1.39
SKP1-201ENST00000328392 ITGAEP38570 1179 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms