RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 DDAH1O94760 285 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 NEFHP12036 1026 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 EZRP15311 586 aaKnown RBP12.91□□□□□ -0.34
COL4A5-201ENST00000328300 ANO1Q5XXA6 986 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 DHX58Q96C10 678 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 PDE8BO95263 885 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 PPRC1Q5VV67 1664 aaKnown RBP12.9□□□□□ -0.34
COL4A5-201ENST00000328300 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
COL4A5-201ENST00000328300 EXOC7Q9UPT5 735 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 AKR1B10O60218 316 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 AFMP43652 599 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 CNNM4Q6P4Q7 775 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.9□□□□□ -0.34
COL4A5-201ENST00000328300 CHURC1Q8WUH1 139 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 CGNQ9P2M7 1197 aaKnown RBP12.9□□□□□ -0.34
COL4A5-201ENST00000328300 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
COL4A5-201ENST00000328300 DIP2AQ14689 1571 aa12.9□□□□□ -0.35
COL4A5-201ENST00000328300 KCNQ3O43525 872 aa12.9□□□□□ -0.35
COL4A5-201ENST00000328300 ADRA2BP18089 450 aa12.9□□□□□ -0.35
COL4A5-201ENST00000328300 ATP8A2Q9NTI2 1148 aa12.9□□□□□ -0.35
COL4A5-201ENST00000328300 TYRO3Q06418 890 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 LRRC45Q96CN5 670 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 RXRBP28702 533 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 SNW1Q13573 536 aaKnown RBP12.89□□□□□ -0.35
COL4A5-201ENST00000328300 SKIDA1Q1XH10 827 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 PANK2Q9BZ23 570 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 GOLGA6L10A0A0M3HER8 536 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 TAF5LO75529 589 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL4A5-201ENST00000328300 SWAP70Q9UH65 585 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 GCOM1H8Y6P7 765 aaPredicted RBP12.89□□□□□ -0.35
COL4A5-201ENST00000328300 MYZAPP0CAP1 466 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 MARCKSP29966 332 aaPredicted RBP12.89□□□□□ -0.35
COL4A5-201ENST00000328300 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 MED23Q9ULK4 1368 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 E7EWF7 191 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 PPIP5K2O43314 1243 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
COL4A5-201ENST00000328300 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 TNNT1P13805 278 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 MCM7P33993 719 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
COL4A5-201ENST00000328300 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
COL4A5-201ENST00000328300 CLTCQ00610 1675 aaKnown RBP12.88□□□□□ -0.35
COL4A5-201ENST00000328300 H7C1D1 291 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 SLC1A4P43007 532 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 CHRNDQ07001 517 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 VWA3BQ502W6 1294 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 URI1O94763 535 aaPredicted RBP12.88□□□□□ -0.35
COL4A5-201ENST00000328300 PDE6AP16499 860 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
COL4A5-201ENST00000328300 HOXA7P31268 230 aaPredicted RBP12.88□□□□□ -0.35
COL4A5-201ENST00000328300 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
COL4A5-201ENST00000328300 ZNF335Q9H4Z2 1342 aaPredicted RBP12.88□□□□□ -0.35
COL4A5-201ENST00000328300 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL4A5-201ENST00000328300 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 SMTNP53814 917 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 USPL1Q5W0Q7 1092 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
COL4A5-201ENST00000328300 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
COL4A5-201ENST00000328300 PHACTR2O75167 634 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 USP8P40818 1118 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 MYL5Q02045 173 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 CCDC91Q7Z6B0 441 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 HOOK3Q86VS8 718 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 IFNL3Q8IZI9 196 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
COL4A5-201ENST00000328300 TUBBP07437 444 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 GTF3C6Q969F1 213 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 NT5C3AQ9H0P0 336 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 PFKFB2O60825 505 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 USP40Q9NVE5 1235 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 KDM3AQ9Y4C1 1321 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 TACC1O75410 805 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 PLS1Q14651 629 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 NEK11Q8NG66 645 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms