RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MAST3O60307 1309 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 GOLGA8BA8MQT2 603 aa14.58□□□□□ -0.07
CCDC60-201ENST00000327554 GOLIM4O00461 696 aa14.58□□□□□ -0.07
CCDC60-201ENST00000327554 RNF40O75150 1001 aa14.58□□□□□ -0.07
CCDC60-201ENST00000327554 SYF2O95926 243 aaKnown RBP14.58□□□□□ -0.07
CCDC60-201ENST00000327554 AARSP49588 968 aaKnown RBP eCLIP14.58□□□□□ -0.07
CCDC60-201ENST00000327554 PDIA6Q15084 440 aa14.58□□□□□ -0.07
CCDC60-201ENST00000327554 AKAP4Q5JQC9 854 aa14.58□□□□□ -0.07
CCDC60-201ENST00000327554 RAB11FIP4Q86YS3 637 aa14.58□□□□□ -0.07
CCDC60-201ENST00000327554 ENOX1Q8TC92 643 aaKnown RBP14.58□□□□□ -0.07
CCDC60-201ENST00000327554 DDX21Q9NR30 783 aaKnown RBP eCLIP14.58□□□□□ -0.07
CCDC60-201ENST00000327554 UBR1Q8IWV7 1749 aa14.58□□□□□ -0.07
CCDC60-201ENST00000327554 AFDNP55196 1824 aaKnown RBP14.58□□□□□ -0.08
CCDC60-201ENST00000327554 A0A087WUV0 522 aaPredicted RBP14.58□□□□□ -0.08
CCDC60-201ENST00000327554 CTAGE9A4FU28 777 aa14.58□□□□□ -0.08
CCDC60-201ENST00000327554 DNAJC21Q5F1R6 531 aaKnown RBP14.58□□□□□ -0.08
CCDC60-201ENST00000327554 MCTP2Q6DN12 878 aa14.58□□□□□ -0.08
CCDC60-201ENST00000327554 RASGRP2Q7LDG7 609 aa14.58□□□□□ -0.08
CCDC60-201ENST00000327554 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.08
CCDC60-201ENST00000327554 SLC35F6Q8N357 371 aa14.58□□□□□ -0.08
CCDC60-201ENST00000327554 JMYQ8N9B5 988 aa14.58□□□□□ -0.08
CCDC60-201ENST00000327554 NOA1Q8NC60 698 aaKnown RBP14.58□□□□□ -0.08
CCDC60-201ENST00000327554 ACBD3Q9H3P7 528 aa14.58□□□□□ -0.08
CCDC60-201ENST00000327554 A0A1B0GTH6 734 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 CTAGE15A4D2H0 777 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 CTAGE8P0CG41 777 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 E2F4Q16254 413 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 WDR93Q6P2C0 686 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 ZNF530Q6P9A1 599 aaPredicted RBP14.57□□□□□ -0.08
CCDC60-201ENST00000327554 CTAGE6Q86UF2 777 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 CTAGE4Q8IX94 777 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 AFAP1L1Q8TED9 768 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 VIPAS39Q9H9C1 493 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 SAMSN1Q9NSI8 373 aaKnown RBP14.57□□□□□ -0.08
CCDC60-201ENST00000327554 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 KCNH3Q9ULD8 1083 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 TMEM2Q9UHN6 1383 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 TUBBP07437 444 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 WHAMMP3Q1A5X7 153 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 VPS37DQ86XT2 251 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 AIFM3Q96NN9 605 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 NAA15Q9BXJ9 866 aaKnown RBP14.57□□□□□ -0.08
CCDC60-201ENST00000327554 PXDNQ92626 1479 aa14.57□□□□□ -0.08
CCDC60-201ENST00000327554 ZC3H4Q9UPT8 1303 aaKnown RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 RNMTO43148 476 aaKnown RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 TEX33O43247 280 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 PSEN1P49768 467 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 RIC3Q7Z5B4 369 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 NUTM2AQ8IVF1 878 aaPredicted RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 ELOA2Q8IYF1 753 aaPredicted RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 CDC5LQ99459 802 aaKnown RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 CCDC9Q9Y3X0 531 aaKnown RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 C5P01031 1676 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 CPLX1O14810 134 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 PRC1O43663 620 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 ABL1P00519 1130 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 EIF5P55010 431 aaKnown RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 RBL2Q08999 1139 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 NT5DC1Q5TFE4 455 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 MB21D2Q8IYB1 491 aaPredicted RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 MLKLQ8NB16 471 aa14.56□□□□□ -0.08
CCDC60-201ENST00000327554 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
CCDC60-201ENST00000327554 M0R2C6 588 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 ANTXR2P58335 489 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 PIP4K2BP78356 416 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 ZNF827Q17R98 1081 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 KAT2BQ92831 832 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 SECISBP2LQ93073 1101 aaKnown RBP14.55□□□□□ -0.08
CCDC60-201ENST00000327554 CEP89Q96ST8 783 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 NAPGQ99747 312 aaPredicted RBP14.55□□□□□ -0.08
CCDC60-201ENST00000327554 FOXP2O15409 715 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 PBX1P40424 430 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 SARSP49591 514 aaKnown RBP14.55□□□□□ -0.08
CCDC60-201ENST00000327554 GSCP56915 257 aaPredicted RBP14.55□□□□□ -0.08
CCDC60-201ENST00000327554 MORC3Q14149 939 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
CCDC60-201ENST00000327554 MICALL1Q8N3F8 863 aa14.55□□□□□ -0.08
CCDC60-201ENST00000327554 CDHR2Q9BYE9 1310 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 SPEF2Q9C093 1822 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 SHOX2O60902 331 aaPredicted RBP14.54□□□□□ -0.08
CCDC60-201ENST00000327554 AMPD2Q01433 879 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 NEXNQ0ZGT2 675 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 POSTNQ15063 836 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 TICAM2Q86XR7 235 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 GPATCH11Q8N954 259 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
CCDC60-201ENST00000327554 MYD88Q99836 296 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 HPCAL4Q9UM19 191 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 OVOS2A0A0G2JMS6 1433 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 MAP3K15Q6ZN16 1313 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 EXOC5O00471 708 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 RNF113AO15541 343 aaKnown RBP14.54□□□□□ -0.08
CCDC60-201ENST00000327554 FECHP22830 423 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 HAND2P61296 217 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 SLC9C2Q5TAH2 1124 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 KRT40Q6A162 431 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 IGSF22Q8N9C0 903 aa14.54□□□□□ -0.08
CCDC60-201ENST00000327554 ALG1Q9BT22 464 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms