RNA–Protein interactions for RNA: ENST00000320954.10

CRTAP-201, Transcript of cartilage associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CRTAP, Length 6,630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-201ENST00000320954 FAM204AQ9H8W3 233 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 ANKRD36BQ8N2N9 1353 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 A0A1B0GUL7 405 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 OATP04181 439 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 CCDC6Q16204 474 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 CEP112Q8N8E3 955 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 POLIQ9UNA4 740 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 GNAT2P19087 354 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 ABI1Q8IZP0 508 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 MMS19Q96T76 1030 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 CTAGE5O15320 804 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
CRTAP-201ENST00000320954 HOOK2Q96ED9 719 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 TRAF5O00463 557 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 YARSP54577 528 aaKnown RBP13.12□□□□□ -0.31
CRTAP-201ENST00000320954 LRMPQ12912 555 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 CCDC14Q49A88 953 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 PRPF31Q8WWY3 499 aaKnown RBP13.12□□□□□ -0.31
CRTAP-201ENST00000320954 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 ST7Q9NRC1 585 aa13.12□□□□□ -0.31
CRTAP-201ENST00000320954 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 PPP1R12AO14974 1030 aaPredicted RBP13.11□□□□□ -0.31
CRTAP-201ENST00000320954 KCNK9Q9NPC2 374 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 TLDC2A0PJX2 215 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
CRTAP-201ENST00000320954 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 RYBPQ8N488 228 aaPredicted RBP13.11□□□□□ -0.31
CRTAP-201ENST00000320954 RASAL2Q9UJF2 1139 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
CRTAP-201ENST00000320954 C6orf163Q5TEZ5 329 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
CRTAP-201ENST00000320954 ABCF3Q9NUQ8 709 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 PPFIA1Q13136 1202 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 CASC4Q6P4E1 433 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 MYCT1Q8N699 235 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 AOPEPQ8N6M6 819 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 IP6K1Q92551 441 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
CRTAP-201ENST00000320954 FAM102BQ5T8I3 360 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 DYMQ7RTS9 669 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 GANCQ8TET4 914 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 FLT4P35916 1363 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 HSF2BPO75031 334 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 IFT81Q8WYA0 676 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 NOC2LQ9Y3T9 749 aaKnown RBP13.1□□□□□ -0.31
CRTAP-201ENST00000320954 UBN2Q6ZU65 1347 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
CRTAP-201ENST00000320954 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 SATB1Q01826 763 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 EEPD1Q7L9B9 569 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
CRTAP-201ENST00000320954 ZNF165P49910 485 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 ANO6Q4KMQ2 910 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 SPATA24Q86W54 205 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
CRTAP-201ENST00000320954 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
CRTAP-201ENST00000320954 SH3TC1Q8TE82 1336 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 ATP2A1O14983 1001 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 ADCY5O95622 1261 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 PUM3Q15397 648 aaKnown RBP13.09□□□□□ -0.31
CRTAP-201ENST00000320954 G2E3Q7L622 706 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
CRTAP-201ENST00000320954 PDE8AO60658 829 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 SLC4A1P02730 911 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 SV2BQ7L1I2 683 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 PPME1Q9Y570 386 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 TBC1D31Q96DN5 1066 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 AS3MTQ9HBK9 375 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 TSPOAP1O95153 1857 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 MAN1A1P33908 653 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 CYLC1P35663 651 aaPredicted RBP13.09□□□□□ -0.31
CRTAP-201ENST00000320954 RNASELQ05823 741 aaKnown RBP13.09□□□□□ -0.31
CRTAP-201ENST00000320954 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
CRTAP-201ENST00000320954 CCDC125Q86Z20 511 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
CRTAP-201ENST00000320954 DNM1Q05193 864 aaKnown RBP13.08□□□□□ -0.31
CRTAP-201ENST00000320954 INF2Q27J81 1249 aa13.08□□□□□ -0.31
CRTAP-201ENST00000320954 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.31
CRTAP-201ENST00000320954 CHMP6Q96FZ7 201 aa13.08□□□□□ -0.31
CRTAP-201ENST00000320954 SNW1Q13573 536 aaKnown RBP13.08□□□□□ -0.32
CRTAP-201ENST00000320954 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
CRTAP-201ENST00000320954 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
CRTAP-201ENST00000320954 RAD17O75943 681 aa13.08□□□□□ -0.32
CRTAP-201ENST00000320954 TNNI1P19237 187 aa13.08□□□□□ -0.32
CRTAP-201ENST00000320954 NELFCDQ8IXH7 590 aa13.08□□□□□ -0.32
CRTAP-201ENST00000320954 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
CRTAP-201ENST00000320954 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
CRTAP-201ENST00000320954 SEPT10Q9P0V9 454 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms