RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 MAIP1Q8WWC4 291 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 SENP2Q9HC62 589 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 PNMA2Q9UL42 364 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 ZNF777Q9ULD5 760 aaPredicted RBP10.49□□□□□ -0.73
BDNF-201ENST00000314915 CFTRP13569 1480 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 STXBP3O00186 592 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 KIF5BP33176 963 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 AMPHP49418 695 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 CCDC155Q8N6L0 562 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 TEKT4Q8WW24 435 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 ZMAT2Q96NC0 199 aaKnown RBP10.49□□□□□ -0.73
BDNF-201ENST00000314915 ANKRD27Q96NW4 1050 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 BCL2L13Q9BXK5 485 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 TNMDQ9H2S6 317 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 DENND4BO75064 1496 aaPredicted RBP10.49□□□□□ -0.73
BDNF-201ENST00000314915 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 KIF14Q15058 1648 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 NSUN2Q08J23 767 aaKnown RBP eCLIP10.49□□□□□ -0.73
BDNF-201ENST00000314915 CBX3Q13185 183 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 ARID5BQ14865 1188 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 NANOGNBQ7Z5D8 188 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 IGSF22Q8N9C0 903 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 USP33Q8TEY7 942 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 ABCB6Q9NP58 842 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 GOLGA8AA7E2F4 631 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 NPTXRO95502 500 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 CCDC166P0CW27 439 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 MXRA7P84157 204 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 MYO1EQ12965 1108 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 NAA16Q6N069 864 aaPredicted RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 CHMP7Q8WUX9 453 aaPredicted RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 GCC1Q96CN9 775 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 WDR35Q9P2L0 1181 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 CTDP1Q9Y5B0 961 aaPredicted RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 EIF3FO00303 357 aaPredicted RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 BIN1O00499 593 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 CHMP4BP1P59074 171 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 FAM228AQ86W67 206 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 PPP2R3CQ969Q6 453 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 DDX19AQ9NUU7 478 aaKnown RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 SH3BGRP55822 239 aaPredicted RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 PPP1R15BQ5SWA1 713 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 CCDC121Q6ZUS5 278 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 SRCIN1Q9C0H9 1055 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 TAOK3Q9H2K8 898 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 QPCTLQ9NXS2 382 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 NOP53Q9NZM5 478 aaKnown RBP10.48□□□□□ -0.73
BDNF-201ENST00000314915 CIDEBQ9UHD4 219 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 RTL1A6NKG5 1358 aa10.48□□□□□ -0.73
BDNF-201ENST00000314915 GOLGA6L4A6NEF3 574 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 PSMC4P43686 418 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 GNAQP50148 359 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 PHEXP78562 749 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 PACS1Q6VY07 963 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 FNBP4Q8N3X1 1017 aaPredicted RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 NACC2Q96BF6 587 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 NAP1L3Q99457 506 aaPredicted RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 MOV10L1Q9BXT6 1211 aaKnown RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 ANO10Q9NW15 660 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 DDX25Q9UHL0 483 aaKnown RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 ATAD2BQ9ULI0 1458 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 BCRP11274 1271 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 VIMP08670 466 aaKnown RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 MYCLP1P12525 358 aaPredicted RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 NLRP5P59047 1200 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 ARPC4P59998 168 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 GNGT1P63211 74 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 THOC7Q6I9Y2 204 aaKnown RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 TRIM65Q6PJ69 517 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 NCCRP1Q6ZVX7 275 aaPredicted RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 SRGAP1Q7Z6B7 1085 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 DAAM1Q9Y4D1 1078 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 SAMM50Q9Y512 469 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 TARSL2A2RTX5 802 aaKnown RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 USH1GQ495M9 461 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 NBPF14Q5TI25 921 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 DUSP9Q99956 384 aaKnown RBP10.47□□□□□ -0.73
BDNF-201ENST00000314915 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
BDNF-201ENST00000314915 MSH6P52701 1360 aa10.46□□□□□ -0.73
BDNF-201ENST00000314915 FGD5Q6ZNL6 1462 aa10.46□□□□□ -0.73
BDNF-201ENST00000314915 P4HA2O15460 535 aa10.46□□□□□ -0.73
BDNF-201ENST00000314915 FIBPO43427 364 aa10.46□□□□□ -0.73
BDNF-201ENST00000314915 PFDN1O60925 122 aa10.46□□□□□ -0.73
BDNF-201ENST00000314915 ZSCAN22P10073 491 aaPredicted RBP10.46□□□□□ -0.73
BDNF-201ENST00000314915 USP11P51784 963 aa10.46□□□□□ -0.73
BDNF-201ENST00000314915 PABPC1LQ4VXU2 614 aaKnown RBP10.46□□□□□ -0.73
BDNF-201ENST00000314915 UIMC1Q96RL1 719 aa10.46□□□□□ -0.73
BDNF-201ENST00000314915 TCOF1Q13428 1488 aaKnown RBP10.46□□□□□ -0.73
BDNF-201ENST00000314915 MSL3P1P0C860 447 aa10.46□□□□□ -0.74
BDNF-201ENST00000314915 SMC1BQ8NDV3 1235 aa10.46□□□□□ -0.74
BDNF-201ENST00000314915 UHMK1Q8TAS1 419 aaKnown RBP10.46□□□□□ -0.74
BDNF-201ENST00000314915 ABCC2Q92887 1545 aa10.46□□□□□ -0.74
BDNF-201ENST00000314915 KDM1AO60341 852 aa10.46□□□□□ -0.74
BDNF-201ENST00000314915 HDLBPQ00341 1268 aaKnown RBP10.46□□□□□ -0.74
BDNF-201ENST00000314915 GIGYF2Q6Y7W6 1299 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms