RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MX1P20591 662 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 PDE4AP27815 886 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 NF2P35240 595 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 TNNI2P48788 182 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 VGLL4Q14135 290 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 LCORLQ8N3X6 602 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 SDR42E1Q8WUS8 393 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 SEC62Q99442 399 aaKnown RBP14.64□□□□□ -0.07
SCFD1-201ENST00000311943 RIOK1Q9BRS2 568 aaKnown RBP14.64□□□□□ -0.07
SCFD1-201ENST00000311943 RWDD1Q9H446 243 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-201ENST00000311943 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 ATRNL1Q5VV63 1379 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 MAST2Q6P0Q8 1798 aa14.64□□□□□ -0.07
SCFD1-201ENST00000311943 FOXN1O15353 648 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 SLC10A3P09131 477 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 JAG1P78504 1218 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 SUPT20HL1Q3ZLR7 823 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCFD1-201ENST00000311943 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 PUS7LQ9H0K6 701 aaKnown RBP14.63□□□□□ -0.07
SCFD1-201ENST00000311943 PPP2R3BQ9Y5P8 575 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 ADD2P35612 726 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 GSTO1P78417 241 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 MAP3K12Q12852 859 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 ARMC9Q7Z3E5 817 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCFD1-201ENST00000311943 WRNIP1Q96S55 665 aa14.63□□□□□ -0.07
SCFD1-201ENST00000311943 PPP1R12BO60237 982 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-201ENST00000311943 LDHCP07864 332 aa14.62□□□□□ -0.07
SCFD1-201ENST00000311943 PDE1AP54750 535 aa14.62□□□□□ -0.07
SCFD1-201ENST00000311943 FKBP1CQ5VVH2 108 aa14.62□□□□□ -0.07
SCFD1-201ENST00000311943 CHD1LQ86WJ1 897 aa14.62□□□□□ -0.07
SCFD1-201ENST00000311943 OSBPL5Q9H0X9 879 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-201ENST00000311943 FLT1P17948 1338 aa14.62□□□□□ -0.07
SCFD1-201ENST00000311943 PPP4CP60510 307 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 NUCB1Q02818 461 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 MAP3K11Q16584 847 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 DNAJC18Q9H819 358 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 WBP1LQ9NX94 342 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 SNCAIPQ9Y6H5 919 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 SIPA1L1O43166 1804 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 CYP2D7A0A087X1C5 515 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 CYP2D6P10635 497 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 PLEKHM2Q8IWE5 1019 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 SLF2Q8IX21 1173 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 OSBP2Q969R2 916 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 SLC10A4Q96EP9 437 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 HHIPL1Q96JK4 782 aa14.61□□□□□ -0.07
SCFD1-201ENST00000311943 PHF20L1A8MW92 1017 aa14.6□□□□□ -0.07
SCFD1-201ENST00000311943 ENTPD3O75355 529 aa14.6□□□□□ -0.07
SCFD1-201ENST00000311943 MBD4O95243 580 aa14.6□□□□□ -0.07
SCFD1-201ENST00000311943 FKBP1BP68106 108 aa14.6□□□□□ -0.07
SCFD1-201ENST00000311943 DGKZQ13574 1117 aa14.6□□□□□ -0.07
SCFD1-201ENST00000311943 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
SCFD1-201ENST00000311943 R3HDMLQ9H3Y0 253 aa14.6□□□□□ -0.07
SCFD1-201ENST00000311943 MAGEB6P1A0A0J9YX57 407 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 ECE1P42892 770 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 PLCD1P51178 756 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 SPRYD7Q5W111 196 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 OPTNQ96CV9 577 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 CENPFP49454 3210 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 M0R2C6 588 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 BAG3O95817 575 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 MAP3K9P80192 1104 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 TTF1Q15361 905 aaPredicted RBP14.59□□□□□ -0.07
SCFD1-201ENST00000311943 CCDC129Q6ZRS4 1044 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 ANKRD13AQ8IZ07 590 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 KBTBD3Q8NAB2 608 aa14.59□□□□□ -0.07
SCFD1-201ENST00000311943 THSD7BQ9C0I4 1608 aa14.58□□□□□ -0.07
SCFD1-201ENST00000311943 IREB2P48200 963 aaKnown RBP14.58□□□□□ -0.08
SCFD1-201ENST00000311943 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 WNK4Q96J92 1243 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 PTPN18Q99952 460 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 TRPA1O75762 1119 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 USP5P45974 858 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 LBX1P52954 281 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 NOGQ13253 232 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 COL13A1Q5TAT6 717 aaPredicted RBP14.58□□□□□ -0.08
SCFD1-201ENST00000311943 CCDC102AQ96A19 550 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 NOL10Q9BSC4 688 aaKnown RBP14.58□□□□□ -0.08
SCFD1-201ENST00000311943 STAP2Q9UGK3 403 aa14.58□□□□□ -0.08
SCFD1-201ENST00000311943 RPAP1Q9BWH6 1393 aaPredicted RBP14.57□□□□□ -0.08
SCFD1-201ENST00000311943 IRF6O14896 467 aa14.57□□□□□ -0.08
SCFD1-201ENST00000311943 SLC44A5Q8NCS7 719 aa14.57□□□□□ -0.08
SCFD1-201ENST00000311943 FOCADQ5VW36 1801 aa14.57□□□□□ -0.08
SCFD1-201ENST00000311943 IGF2BP3O00425 579 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCFD1-201ENST00000311943 GLRX3O76003 335 aaKnown RBP14.56□□□□□ -0.08
SCFD1-201ENST00000311943 MAP2K2P36507 400 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 AAMPQ13685 434 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 FSD1Q9BTV5 496 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 ZNF341Q9BYN7 854 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 ZNF112Q9UJU3 913 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 MYH7P12883 1935 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 BAZ2AQ9UIF9 1905 aaKnown RBP14.56□□□□□ -0.08
SCFD1-201ENST00000311943 GDF11O95390 407 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 TBC1D8O95759 1140 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 DYNLL2Q96FJ2 89 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 GPATCH3Q96I76 525 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms