RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 TIGD1Q96MW7 591 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 PNPLA7Q6ZV29 1317 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 USP27XA6NNY8 438 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 FMNL1O95466 1100 aaPredicted RBP17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 TPD52L1Q16890 204 aaPredicted RBP17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 SLC26A6Q9BXS9 759 aa17.61■□□□□ 0.41
SPIRE1-201ENST00000309836 SMTNL1A8MU46 457 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 SKILP12757 684 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 SYKP43405 635 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 SSRP1Q08945 709 aaKnown RBP17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 ITPK1Q13572 414 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 RESP18Q5W5W9 173 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 STAG1Q8WVM7 1258 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 KRT23Q9C075 422 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 CNNM2Q9H8M5 875 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 SLC12A7Q9Y666 1083 aa17.6■□□□□ 0.41
SPIRE1-201ENST00000309836 ROBO1Q9Y6N7 1651 aa17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 GUCY1A2P33402 732 aa17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 GNL2Q13823 731 aaKnown RBP17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 CCDC152Q4G0S7 254 aa17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 PARP10Q53GL7 1025 aa17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 XPO4Q9C0E2 1151 aaKnown RBP17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 TUBE1Q9UJT0 475 aa17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 SLC4A4Q9Y6R1 1079 aa17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 CICQ96RK0 1608 aaPredicted RBP17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 MYH14Q7Z406 1995 aaKnown RBP17.59■□□□□ 0.41
SPIRE1-201ENST00000309836 IFNAR1P17181 557 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 ATP6V1AP38606 617 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 TRIM29Q14134 588 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 MFSD6Q6ZSS7 791 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 JMYQ8N9B5 988 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 ACSBG1Q96GR2 724 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 ARID3AQ99856 593 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 IFNKQ9P0W0 207 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 NRAPQ86VF7 1730 aa17.58■□□□□ 0.41
SPIRE1-201ENST00000309836 AHDC1Q5TGY3 1603 aaPredicted RBP17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 GNAT2P19087 354 aa17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 TDO2P48775 406 aa17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 CHRNDQ07001 517 aa17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 RRP12Q5JTH9 1297 aaKnown RBP17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 ANKRD7Q92527 254 aa17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 ZKSCAN3Q9BRR0 538 aa17.58■□□□□ 0.4
SPIRE1-201ENST00000309836 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
SPIRE1-201ENST00000309836 A0A0G2JS52 829 aa17.57■□□□□ 0.4
SPIRE1-201ENST00000309836 CUTAO60888 179 aa17.57■□□□□ 0.4
SPIRE1-201ENST00000309836 GSDMDP57764 484 aa17.57■□□□□ 0.4
SPIRE1-201ENST00000309836 ISM2Q6H9L7 571 aa17.57■□□□□ 0.4
SPIRE1-201ENST00000309836 HSD3B7Q9H2F3 369 aa17.57■□□□□ 0.4
SPIRE1-201ENST00000309836 IMPACTQ9P2X3 320 aa17.57■□□□□ 0.4
SPIRE1-201ENST00000309836 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 SMC2O95347 1197 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 SIK1P57059 783 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 PNOCQ13519 176 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 NYAP1Q6ZVC0 841 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 CCDC94Q9BW85 323 aaPredicted RBP17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 NACAP1Q9BZK3 213 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 NIP7Q9Y221 180 aaKnown RBP eCLIP17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 IKBKBO14920 756 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 MMP1P03956 469 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 TOB1P50616 345 aaPredicted RBP17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 WTAPQ15007 396 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 RTN1Q16799 776 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 CEP135Q66GS9 1140 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 TMC6Q7Z403 805 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 STK11IPQ8N1F8 1099 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 MARCH10Q8NA82 808 aaPredicted RBP17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 KCND1Q9NSA2 647 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 SPATA31A1Q5TZJ5 1347 aa17.56■□□□□ 0.4
SPIRE1-201ENST00000309836 BTBD18B2RXH4 712 aa17.55■□□□□ 0.4
SPIRE1-201ENST00000309836 ARMCX5Q6P1M9 558 aa17.55■□□□□ 0.4
SPIRE1-201ENST00000309836 CCAR2Q8N163 923 aaKnown RBP17.55■□□□□ 0.4
SPIRE1-201ENST00000309836 WASF1Q92558 559 aa17.55■□□□□ 0.4
SPIRE1-201ENST00000309836 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
SPIRE1-201ENST00000309836 PAXBP1Q9Y5B6 917 aa17.55■□□□□ 0.4
SPIRE1-201ENST00000309836 CYP7A1P22680 504 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 PPARAQ07869 468 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 DDB1Q16531 1140 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 LONRF3Q496Y0 759 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 CDCA7Q9BWT1 371 aaPredicted RBP17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 IQSEC3Q9UPP2 1182 aaPredicted RBP17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 TPM4P67936 248 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 FANCCQ00597 558 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 NCBP1Q09161 790 aaKnown RBP17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 KRBA2Q6ZNG9 492 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms