RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 GTF3C6Q969F1 213 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 TM6SF1Q9BZW5 370 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 MTMR6Q9Y217 621 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 TOGARAM1Q9Y4F4 1720 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 ECM2O94769 699 aaPredicted RBP10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 PDE6BP35913 854 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 TNKSO95271 1327 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 BRD1O95696 1058 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 SLC3A2P08195 630 aaKnown RBP10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 TM4SF1P30408 202 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 TRIM22Q8IYM9 498 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 WDR66Q8TBY9 1149 aa10.03□□□□□ -0.8
LCLAT1-201ENST00000309052 BBOX1O75936 387 aa10.02□□□□□ -0.8
LCLAT1-201ENST00000309052 SPTY2D1Q68D10 685 aaPredicted RBP10.02□□□□□ -0.8
LCLAT1-201ENST00000309052 NSUN4Q96CB9 384 aaKnown RBP10.02□□□□□ -0.8
LCLAT1-201ENST00000309052 SDF4Q9BRK5 362 aa10.02□□□□□ -0.8
LCLAT1-201ENST00000309052 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.8
LCLAT1-201ENST00000309052 ADRA2BP18089 450 aa10.02□□□□□ -0.81
LCLAT1-201ENST00000309052 RTN1Q16799 776 aa10.02□□□□□ -0.81
LCLAT1-201ENST00000309052 RASGRP2Q7LDG7 609 aa10.02□□□□□ -0.81
LCLAT1-201ENST00000309052 USP40Q9NVE5 1235 aa10.02□□□□□ -0.81
LCLAT1-201ENST00000309052 ST3GAL1Q11201 340 aa10.02□□□□□ -0.81
LCLAT1-201ENST00000309052 CUL4AQ13619 759 aa10.02□□□□□ -0.81
LCLAT1-201ENST00000309052 PKD1L3Q7Z443 1732 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 BIN1O00499 593 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 LDHCP07864 332 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 ANTXR2P58335 489 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 PDE4BQ07343 736 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 TRMT1LQ7Z2T5 733 aaKnown RBP10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 GAS2L3Q86XJ1 694 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 INTS4Q96HW7 963 aaKnown RBP10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 BRIP1Q9BX63 1249 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 LMBRD1Q9NUN5 540 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 ARFGEF2Q9Y6D5 1785 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 ALDH1B1P30837 517 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 SLC10A5Q5PT55 438 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 CTCFLQ8NI51 663 aaPredicted RBP10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 RNF41Q9H4P4 317 aaPredicted RBP10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 USP54Q70EL1 1684 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 TCP10L2B9ZVM9 353 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 ATP2B4P23634 1241 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 SAFBQ15424 915 aaKnown RBP eCLIP10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 CATIPQ7Z7H3 387 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 VPS54Q9P1Q0 977 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 LEMD3Q9Y2U8 911 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 FOXP2O15409 715 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 SRGNP10124 158 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 APOA5Q6Q788 366 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 GPT2Q8TD30 523 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 TMEM63CQ9P1W3 806 aa10.01□□□□□ -0.81
LCLAT1-201ENST00000309052 CDC27P30260 824 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 PLCD1P51178 756 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 FBXO33Q7Z6M2 555 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 NSUN7Q8NE18 718 aaKnown RBP10□□□□□ -0.81
LCLAT1-201ENST00000309052 KRT23Q9C075 422 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 DCP1AQ9NPI6 582 aaPredicted RBP10□□□□□ -0.81
LCLAT1-201ENST00000309052 SKOR2Q2VWA4 1001 aaPredicted RBP10□□□□□ -0.81
LCLAT1-201ENST00000309052 LRRC47Q8N1G4 583 aaKnown RBP10□□□□□ -0.81
LCLAT1-201ENST00000309052 PNPLA7Q6ZV29 1317 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
LCLAT1-201ENST00000309052 CCDC96Q2M329 555 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 MASTLQ96GX5 879 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 KAT14Q9H8E8 782 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 NPR1P16066 1061 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 TDRD3Q9H7E2 651 aaKnown RBP10□□□□□ -0.81
LCLAT1-201ENST00000309052 DACT1Q9NYF0 836 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 ABCA3Q99758 1704 aa10□□□□□ -0.81
LCLAT1-201ENST00000309052 TTC6Q86TZ1 520 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 ZNF654Q8IZM8 581 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 GLI3P10071 1580 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 ZSCAN23Q3MJ62 389 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 HSP90AA4PQ58FG1 418 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 GNAT2P19087 354 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 GUCY1A2P33402 732 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 CTR9Q6PD62 1173 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 ZNF384Q8TF68 577 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 A0A1B0GVL5 298 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 DPEP1P16444 411 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 POLD1P28340 1107 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 MIGA2Q7L4E1 593 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 DRC7Q8IY82 874 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 GPKOWQ92917 476 aaPredicted RBP eCLIP9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 SYAP1Q96A49 352 aaPredicted RBP9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 NUP98P52948 1817 aa9.99□□□□□ -0.81
LCLAT1-201ENST00000309052 FRMPD2Q68DX3 1309 aaPredicted RBP9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 TCRBV5S4A2TA0A5A2 114 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 BTBD18B2RXH4 712 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 NASPP49321 788 aaPredicted RBP9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 DHX8Q14562 1220 aaKnown RBP9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 CCDC73Q6ZRK6 1079 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 MB21D2Q8IYB1 491 aaPredicted RBP9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 OGFOD1Q8N543 542 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 USP28Q96RU2 1077 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 GRPEL1Q9HAV7 217 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 PCNTO95613 3336 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms