RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 ZSWIM5Q9P217 1185 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 LOC102724428A0A0B4J2F2 783 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 CRKLP46109 303 aaKnown RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 SIK1P57059 783 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 DPCR1Q3MIW9 517 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 SMARCC2Q8TAQ2 1214 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 C8orf37Q96NL8 207 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 GOLPH3LQ9H4A5 285 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 IL6STP40189 918 aaPredicted RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 PNOCQ13519 176 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 ARID5BQ14865 1188 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 TDRD7Q8NHU6 1098 aaKnown RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 XPO4Q9C0E2 1151 aaKnown RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 ALDH8A1Q9H2A2 487 aaPredicted RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 VAT1LQ9HCJ6 419 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 CTDNEP1O95476 244 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 CASP7P55210 303 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 RASGRF1Q13972 1273 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 TBC1D10CQ8IV04 446 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 ZNF444Q8N0Y2 327 aaPredicted RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
MUC4-201ENST00000308466 CCDC47Q96A33 483 aaKnown RBP12.25□□□□□ -0.45
MUC4-201ENST00000308466 POLR3GO15318 223 aaPredicted RBP12.24□□□□□ -0.45
MUC4-201ENST00000308466 CHRNDQ07001 517 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 PTPN21Q16825 1174 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
MUC4-201ENST00000308466 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
MUC4-201ENST00000308466 RSPH14Q9UHP6 348 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
MUC4-201ENST00000308466 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
MUC4-201ENST00000308466 CYB5R4Q7L1T6 521 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 MCM9Q9NXL9 1143 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 VPS54Q9P1Q0 977 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 RIPOR2Q9Y4F9 1068 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 ZMYM6O95789 1325 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 KIF23Q02241 960 aaPredicted RBP12.24□□□□□ -0.45
MUC4-201ENST00000308466 ZNF174Q15697 407 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 AATFQ9NY61 560 aaKnown RBP eCLIP12.24□□□□□ -0.45
MUC4-201ENST00000308466 DNAI1Q9UI46 699 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 PAXBP1Q9Y5B6 917 aa12.24□□□□□ -0.45
MUC4-201ENST00000308466 CCP110O43303 1012 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 FANCCQ00597 558 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 PDE4BQ07343 736 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 TRIM28Q13263 835 aaKnown RBP12.23□□□□□ -0.45
MUC4-201ENST00000308466 STAMQ92783 540 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
MUC4-201ENST00000308466 STRBPQ96SI9 672 aaKnown RBP12.23□□□□□ -0.45
MUC4-201ENST00000308466 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.23□□□□□ -0.45
MUC4-201ENST00000308466 MYL5Q02045 173 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 LCORLQ8N3X6 602 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 UBXN4Q92575 508 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 USP17L12C9JPN9 530 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 USP17L21D6R901 530 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 IPO7O95373 1038 aaKnown RBP12.23□□□□□ -0.45
MUC4-201ENST00000308466 DEXIO95424 95 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 NLRP12P59046 1061 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 ZNF654Q8IZM8 581 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 KAT14Q9H8E8 782 aa12.23□□□□□ -0.45
MUC4-201ENST00000308466 CCDC194A0A1B0GVG4 234 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 SYT10Q6XYQ8 523 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 MB21D2Q8IYB1 491 aaPredicted RBP12.22□□□□□ -0.45
MUC4-201ENST00000308466 SETD1AO15047 1707 aaKnown RBP12.22□□□□□ -0.45
MUC4-201ENST00000308466 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 GNPATO15228 680 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 CMA1P23946 247 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 RFC4P35249 363 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 PPARAQ07869 468 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
MUC4-201ENST00000308466 FAM47AQ5JRC9 791 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.22□□□□□ -0.45
MUC4-201ENST00000308466 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
MUC4-201ENST00000308466 PALLDQ8WX93 1383 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 CYP2D7A0A087X1C5 515 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 AP5Z1O43299 807 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 SLC39A14Q15043 492 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 RILPL1Q5EBL4 403 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 TEX35Q5T0J7 233 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
MUC4-201ENST00000308466 BANK1Q8NDB2 785 aa12.22□□□□□ -0.45
MUC4-201ENST00000308466 VWA3AA6NCI4 1184 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 KIF2AO00139 706 aaPredicted RBP12.21□□□□□ -0.45
MUC4-201ENST00000308466 SH2B2O14492 632 aaPredicted RBP12.21□□□□□ -0.45
MUC4-201ENST00000308466 FDPSP14324 419 aaKnown RBP12.21□□□□□ -0.45
MUC4-201ENST00000308466 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 FANCBQ8NB91 859 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 RGS22Q8NE09 1264 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 CUTAO60888 179 aa12.21□□□□□ -0.45
MUC4-201ENST00000308466 MCM7P33993 719 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms