RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CTAGE5O15320 804 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 BMS1Q14692 1282 aaKnown RBP16.75■□□□□ 0.27
PTPN9-201ENST00000306726 ERO1AQ96HE7 468 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 RREB1Q92766 1687 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 GOLGA8AA7E2F4 631 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 CTDSPL2Q05D32 466 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 LDHAL6AQ6ZMR3 332 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 DHX58Q96C10 678 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 PLSCR1O15162 318 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 FGAP02671 866 aa16.75■□□□□ 0.27
PTPN9-201ENST00000306726 MRPS25P82663 173 aaKnown RBP16.75■□□□□ 0.27
PTPN9-201ENST00000306726 DDX41Q9UJV9 622 aaKnown RBP16.75■□□□□ 0.27
PTPN9-201ENST00000306726 PRDM1O75626 825 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 ATP6V1AP38606 617 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 KIF20AO95235 890 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN9-201ENST00000306726 SENP2Q9HC62 589 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 POLR2DO15514 142 aaKnown RBP16.74■□□□□ 0.27
PTPN9-201ENST00000306726 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
PTPN9-201ENST00000306726 TDO2P48775 406 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 SF3B2Q13435 895 aaKnown RBP16.74■□□□□ 0.27
PTPN9-201ENST00000306726 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 E4F1Q66K89 784 aaPredicted RBP16.74■□□□□ 0.27
PTPN9-201ENST00000306726 ANKRD7Q92527 254 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 TIGD1Q96MW7 591 aa16.74■□□□□ 0.27
PTPN9-201ENST00000306726 METTL22Q9BUU2 404 aaPredicted RBP16.74■□□□□ 0.27
PTPN9-201ENST00000306726 KIF28PB7ZC32 967 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 ANO1Q5XXA6 986 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 AIDAQ96BJ3 306 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 DRC1Q96MC2 740 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 MATR3P43243 847 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 GSDMDP57764 484 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 CCZ1BP86790 482 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 CCZ1P86791 482 aaPredicted RBP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 KRBA2Q6ZNG9 492 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 PUS7LQ9H0K6 701 aaKnown RBP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 RNF113AO15541 343 aaKnown RBP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 SCARF1Q14162 830 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 MTF1Q14872 753 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 TERF2Q15554 542 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 ENOX2Q16206 610 aaKnown RBP16.73■□□□□ 0.27
PTPN9-201ENST00000306726 UIMC1Q96RL1 719 aa16.73■□□□□ 0.27
PTPN9-201ENST00000306726 KCNQ2O43526 872 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 ATP5JP18859 108 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 CAPZA3Q96KX2 299 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 DNAJC21Q5F1R6 531 aaKnown RBP16.72■□□□□ 0.27
PTPN9-201ENST00000306726 PPFIBP1Q86W92 1011 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 VPS18Q9P253 973 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 COL5A3P25940 1745 aaPredicted RBP16.72■□□□□ 0.27
PTPN9-201ENST00000306726 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
PTPN9-201ENST00000306726 VPS37DQ86XT2 251 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 CCNL1Q9UK58 526 aaPredicted RBP16.72■□□□□ 0.27
PTPN9-201ENST00000306726 MAST3O60307 1309 aa16.72■□□□□ 0.27
PTPN9-201ENST00000306726 ZMYND10O75800 440 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 CCDC102BQ68D86 513 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 NFE2L3Q9Y4A8 694 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 PCDHA5Q9Y5H7 936 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 BAZ2BQ9UIF8 2168 aaKnown RBP16.71■□□□□ 0.27
PTPN9-201ENST00000306726 BTBD18B2RXH4 712 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 GPAA1O43292 621 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 PFKFB2O60825 505 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 NCOA7Q8NI08 942 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 RCOR1Q9UKL0 485 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 OAS2P29728 719 aaKnown RBP16.71■□□□□ 0.27
PTPN9-201ENST00000306726 ST5P78524 1137 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 KRT40Q6A162 431 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
PTPN9-201ENST00000306726 CWC25Q9NXE8 425 aaPredicted RBP16.71■□□□□ 0.27
PTPN9-201ENST00000306726 N4BP2Q86UW6 1770 aaPredicted RBP16.71■□□□□ 0.27
PTPN9-201ENST00000306726 CDC25AP30304 524 aa16.71■□□□□ 0.26
PTPN9-201ENST00000306726 PSMB7Q99436 277 aa16.71■□□□□ 0.26
PTPN9-201ENST00000306726 ELP1O95163 1332 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
PTPN9-201ENST00000306726 HNRNPH2P55795 449 aaKnown RBP16.7■□□□□ 0.26
PTPN9-201ENST00000306726 ZNF569Q5MCW4 686 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 XAGE2Q96GT9 111 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 TBC1D2BQ9UPU7 963 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.7■□□□□ 0.26
PTPN9-201ENST00000306726 MRFAP1L1Q96HT8 127 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
PTPN9-201ENST00000306726 CARMIL3Q8ND23 1372 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
PTPN9-201ENST00000306726 LINC00301Q8NCQ3 95 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 KCNG4Q8TDN1 519 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 NAPBQ9H115 298 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 CABP5Q9NP86 173 aa16.7■□□□□ 0.26
PTPN9-201ENST00000306726 SAMSN1Q9NSI8 373 aaKnown RBP16.7■□□□□ 0.26
PTPN9-201ENST00000306726 NEMFO60524 1076 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 TRIM37O94972 964 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms