RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ANKIB1Q9P2G1 1089 aa15.07■□□□□ 0
DDX54-201ENST00000306014 CAMSAP1Q5T5Y3 1602 aa15.07■□□□□ 0
DDX54-201ENST00000306014 MAGEB6P1A0A0J9YX57 407 aa15.06■□□□□ 0
DDX54-201ENST00000306014 FGFR1OPO95684 399 aaKnown RBP15.06■□□□□ 0
DDX54-201ENST00000306014 GNAT2P19087 354 aa15.06■□□□□ 0
DDX54-201ENST00000306014 AMPD3Q01432 767 aa15.06■□□□□ 0
DDX54-201ENST00000306014 CKAP4Q07065 602 aaKnown RBP15.06■□□□□ 0
DDX54-201ENST00000306014 SPECC1LQ69YQ0 1117 aa15.06■□□□□ 0
DDX54-201ENST00000306014 KRBA2Q6ZNG9 492 aa15.06■□□□□ 0
DDX54-201ENST00000306014 FAM114A1Q8IWE2 563 aa15.06■□□□□ 0
DDX54-201ENST00000306014 LUC7L2Q9Y383 392 aaKnown RBP15.06■□□□□ 0
DDX54-201ENST00000306014 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
DDX54-201ENST00000306014 CDC25BP30305 580 aa15.06■□□□□ 0
DDX54-201ENST00000306014 USP8P40818 1118 aa15.06■□□□□ 0
DDX54-201ENST00000306014 C10orf67Q8IYJ2 551 aa15.06■□□□□ 0
DDX54-201ENST00000306014 RAB34Q9BZG1 259 aa15.06■□□□□ 0
DDX54-201ENST00000306014 CTNND2Q9UQB3 1225 aa15.06■□□□□ 0
DDX54-201ENST00000306014 hCG_1642624A0A1W2PR95 340 aa15.06■□□□□ 0
DDX54-201ENST00000306014 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
DDX54-201ENST00000306014 SYCP1Q15431 976 aa15.06■□□□□ 0
DDX54-201ENST00000306014 TMEM266Q2M3C6 531 aa15.06■□□□□ 0
DDX54-201ENST00000306014 DZIP3Q86Y13 1208 aaKnown RBP15.06■□□□□ 0
DDX54-201ENST00000306014 SERTAD1Q9UHV2 236 aa15.06■□□□□ 0
DDX54-201ENST00000306014 ALKQ9UM73 1620 aa15.06■□□□□ 0
DDX54-201ENST00000306014 PRDM1O75626 825 aa15.06■□□□□ 0
DDX54-201ENST00000306014 RBM6P78332 1123 aaKnown RBP15.06■□□□□ 0
DDX54-201ENST00000306014 CCDC40Q4G0X9 1142 aa15.06■□□□□ 0
DDX54-201ENST00000306014 HDXQ7Z353 690 aa15.06■□□□□ 0
DDX54-201ENST00000306014 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
DDX54-201ENST00000306014 V9GY48 417 aaPredicted RBP15.06■□□□□ 0
DDX54-201ENST00000306014 CARMIL3Q8ND23 1372 aa15.05■□□□□ 0
DDX54-201ENST00000306014 A0A1W2PQ27 194 aa15.05■□□□□ 0
DDX54-201ENST00000306014 A0A1W2PQ64 194 aa15.05■□□□□ 0
DDX54-201ENST00000306014 A0A1W2PQD8 194 aa15.05■□□□□ 0
DDX54-201ENST00000306014 KRT86O43790 486 aa15.05■□□□□ 0
DDX54-201ENST00000306014 PHKG2P15735 406 aa15.05■□□□□ 0
DDX54-201ENST00000306014 ASIC1P78348 528 aa15.05■□□□□ 0
DDX54-201ENST00000306014 GOLGA8FQ08AF8 430 aa15.05■□□□□ 0
DDX54-201ENST00000306014 GOLGA8DPQ0D2H9 430 aa15.05■□□□□ 0
DDX54-201ENST00000306014 HEATR3Q7Z4Q2 680 aa15.05■□□□□ 0
DDX54-201ENST00000306014 CMTR1Q8N1G2 835 aaKnown RBP15.05■□□□□ 0
DDX54-201ENST00000306014 PPP1R13BQ96KQ4 1090 aa15.05■□□□□ 0
DDX54-201ENST00000306014 PUS3Q9BZE2 481 aaKnown RBP15.05■□□□□ 0
DDX54-201ENST00000306014 RPAP1Q9BWH6 1393 aaPredicted RBP15.05■□□□□ 0
DDX54-201ENST00000306014 IVLP07476 585 aa15.05■□□□□ -0
DDX54-201ENST00000306014 PTPN12Q05209 780 aaKnown RBP15.05■□□□□ -0
DDX54-201ENST00000306014 SLFNL1Q499Z3 407 aa15.05■□□□□ -0
DDX54-201ENST00000306014 SPTLC3Q9NUV7 552 aa15.05■□□□□ -0
DDX54-201ENST00000306014 SYNRGQ9UMZ2 1314 aa15.05■□□□□ -0
DDX54-201ENST00000306014 OAS2P29728 719 aaKnown RBP15.05■□□□□ -0
DDX54-201ENST00000306014 KIF5AQ12840 1032 aa15.05■□□□□ -0
DDX54-201ENST00000306014 LONRF3Q496Y0 759 aa15.05■□□□□ -0
DDX54-201ENST00000306014 ZMYM1Q5SVZ6 1142 aa15.05■□□□□ -0
DDX54-201ENST00000306014 TAX1BP1Q86VP1 789 aa15.05■□□□□ -0
DDX54-201ENST00000306014 UBA5Q9GZZ9 404 aa15.05■□□□□ -0
DDX54-201ENST00000306014 NCBP1Q09161 790 aaKnown RBP15.04■□□□□ -0
DDX54-201ENST00000306014 CCDC122Q5T0U0 273 aa15.04■□□□□ -0
DDX54-201ENST00000306014 RTL9Q8NET4 1388 aa15.04■□□□□ -0
DDX54-201ENST00000306014 IBSPP21815 317 aaPredicted RBP15.04■□□□□ -0
DDX54-201ENST00000306014 BCCIPQ9P287 314 aaKnown RBP eCLIP15.04■□□□□ -0
DDX54-201ENST00000306014 CTDP1Q9Y5B0 961 aaPredicted RBP15.04■□□□□ -0
DDX54-201ENST00000306014 MAST3O60307 1309 aa15.04■□□□□ -0
DDX54-201ENST00000306014 KRT83P78385 493 aa15.04■□□□□ -0
DDX54-201ENST00000306014 LINC00301Q8NCQ3 95 aa15.04■□□□□ -0
DDX54-201ENST00000306014 CCDC42Q96M95 316 aa15.04■□□□□ -0
DDX54-201ENST00000306014 FAM107BQ9H098 131 aa15.04■□□□□ -0
DDX54-201ENST00000306014 MMRN2Q9H8L6 949 aa15.04■□□□□ -0
DDX54-201ENST00000306014 GPHNQ9NQX3 736 aaPredicted RBP15.04■□□□□ -0
DDX54-201ENST00000306014 PPP2R2CQ9Y2T4 447 aa15.04■□□□□ -0
DDX54-201ENST00000306014 PCDHA5Q9Y5H7 936 aa15.04■□□□□ -0
DDX54-201ENST00000306014 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
DDX54-201ENST00000306014 EPHA10Q5JZY3 1008 aa15.03■□□□□ -0
DDX54-201ENST00000306014 PSDA5PKW4 1024 aaPredicted RBP15.03■□□□□ -0
DDX54-201ENST00000306014 BTBD18B2RXH4 712 aa15.03■□□□□ -0
DDX54-201ENST00000306014 CCDC144BQ3MJ40 725 aa15.03■□□□□ -0
DDX54-201ENST00000306014 RNF187Q5TA31 235 aaPredicted RBP15.03■□□□□ -0
DDX54-201ENST00000306014 KLHL34Q8N239 644 aa15.03■□□□□ -0
DDX54-201ENST00000306014 NAPGQ99747 312 aaPredicted RBP15.03■□□□□ -0
DDX54-201ENST00000306014 NIP7Q9Y221 180 aaKnown RBP eCLIP15.03■□□□□ -0
DDX54-201ENST00000306014 PCDH11XQ9BZA7 1347 aa15.03■□□□□ -0
DDX54-201ENST00000306014 PCDH11YQ9BZA8 1340 aa15.03■□□□□ -0
DDX54-201ENST00000306014 ANKRD18AQ8IVF6 992 aa15.03■□□□□ -0
DDX54-201ENST00000306014 AK9Q5TCS8 1911 aa15.03■□□□□ -0
DDX54-201ENST00000306014 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
DDX54-201ENST00000306014 ADORA1P30542 326 aa15.03■□□□□ -0
DDX54-201ENST00000306014 PTPRMP28827 1452 aa15.02■□□□□ -0
DDX54-201ENST00000306014 KRT9P35527 623 aa15.02■□□□□ -0
DDX54-201ENST00000306014 NOP2P46087 812 aaKnown RBP15.02■□□□□ -0
DDX54-201ENST00000306014 CRB1P82279 1406 aa15.02■□□□□ -0
DDX54-201ENST00000306014 TMCO5BA8MYB1 307 aa15.02■□□□□ -0
DDX54-201ENST00000306014 CALM1P0DP23 149 aa15.02■□□□□ -0
DDX54-201ENST00000306014 CALM2P0DP24 149 aa15.02■□□□□ -0
DDX54-201ENST00000306014 CALM3P0DP25 149 aa15.02■□□□□ -0
DDX54-201ENST00000306014 SMC1AQ14683 1233 aaKnown RBP15.02■□□□□ -0
DDX54-201ENST00000306014 ZSCAN29Q8IWY8 852 aaPredicted RBP15.02■□□□□ -0
DDX54-201ENST00000306014 TACC1O75410 805 aa15.02□□□□□ -0.01
DDX54-201ENST00000306014 TUBB4BP68371 445 aa15.02□□□□□ -0.01
DDX54-201ENST00000306014 PUM3Q15397 648 aaKnown RBP15.02□□□□□ -0.01
DDX54-201ENST00000306014 MAATS1Q7Z4T9 603 aa15.02□□□□□ -0.01
DDX54-201ENST00000306014 NOSTRINQ8IVI9 506 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms