RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ZNF541Q9H0D2 1346 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 C6orf229H3BNL8 230 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 PPIP5K2O43314 1243 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 LMNB1P20700 586 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 GYG1P46976 350 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 MTMR2Q13614 643 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 ATP2B3Q16720 1220 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 WASHC4Q2M389 1173 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 TNNI3KQ59H18 835 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 IFFO2Q5TF58 517 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 C9orf131Q5VYM1 1079 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 DESI1Q6ICB0 168 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 FBXO33Q7Z6M2 555 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 OTUD7AQ8TE49 926 aaPredicted RBP7.28□□□□□ -1.24
SSX3-201ENST00000298396 DBNDD2Q9BQY9 259 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 DBNDD1Q9H9R9 158 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 GPR108Q9NPR9 543 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 CEP126Q9P2H0 1117 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 DBNLQ9UJU6 430 aaKnown RBP7.28□□□□□ -1.24
SSX3-201ENST00000298396 FPGT-TNNI3KV9GXZ4 949 aa7.28□□□□□ -1.24
SSX3-201ENST00000298396 A0A1B0GUL7 405 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 FZD9O00144 591 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 ECE2O60344 883 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 RAB11FIP3O75154 756 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 RFC5P40937 340 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 PHKA1P46020 1223 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 OS9Q13438 667 aaPredicted RBP7.27□□□□□ -1.25
SSX3-201ENST00000298396 SCARF1Q14162 830 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 SKAP1Q86WV1 359 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 C16orf71Q8IYS4 520 aaPredicted RBP7.27□□□□□ -1.25
SSX3-201ENST00000298396 LARGE2Q8N3Y3 721 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 BANK1Q8NDB2 785 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 LPIN2Q92539 896 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 XAGE2Q96GT9 111 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 RNF181Q9P0P0 153 aa7.27□□□□□ -1.25
SSX3-201ENST00000298396 FMNL1O95466 1100 aaPredicted RBP7.26□□□□□ -1.25
SSX3-201ENST00000298396 SLC5A1P13866 664 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 IL1R1P14778 569 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 KCNJ4P48050 445 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 GRIK5Q16478 980 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 PI16Q6UXB8 463 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 ERC1Q8IUD2 1116 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 SUPT20HQ8NEM7 779 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 TDRD7Q8NHU6 1098 aaKnown RBP7.26□□□□□ -1.25
SSX3-201ENST00000298396 KIF1BPQ96EK5 621 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 EYA3Q99504 573 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 MXD3Q9BW11 206 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 LRRCC1Q9C099 1032 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 CCDC8Q9H0W5 538 aaPredicted RBP7.26□□□□□ -1.25
SSX3-201ENST00000298396 VPS33BQ9H267 617 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 RWDD1Q9H446 243 aaPredicted RBP7.26□□□□□ -1.25
SSX3-201ENST00000298396 CD209Q9NNX6 404 aa7.26□□□□□ -1.25
SSX3-201ENST00000298396 IQSEC3Q9UPP2 1182 aaPredicted RBP7.26□□□□□ -1.25
SSX3-201ENST00000298396 BAZ2AQ9UIF9 1905 aaKnown RBP7.25□□□□□ -1.25
SSX3-201ENST00000298396 SHTN1A0MZ66 631 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 CFAP99D6REC4 459 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 PSMD14O00487 310 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 ADH1BP00325 375 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 NEFLP07196 543 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 IFIT1P09914 478 aaKnown RBP7.25□□□□□ -1.25
SSX3-201ENST00000298396 ARID4AP29374 1257 aaPredicted RBP7.25□□□□□ -1.25
SSX3-201ENST00000298396 MCAMP43121 646 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 MMP16P51512 607 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 COPS2P61201 443 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 NUCB1Q02818 461 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 CXCL9Q07325 125 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 TMEM259Q4ZIN3 620 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 HSP90AB4PQ58FF6 505 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 TSHZ3Q63HK5 1081 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 CCDC102BQ68D86 513 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 B4GALNT3Q6L9W6 998 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 AACSQ86V21 672 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 NIM1KQ8IY84 436 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 CERS5Q8N5B7 392 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 FAM160A2Q8N612 972 aaPredicted RBP7.25□□□□□ -1.25
SSX3-201ENST00000298396 GCC1Q96CN9 775 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 NEUROD6Q96NK8 337 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 USB1Q9BQ65 265 aaKnown RBP7.25□□□□□ -1.25
SSX3-201ENST00000298396 ZC3H12CQ9C0D7 883 aaKnown RBP7.25□□□□□ -1.25
SSX3-201ENST00000298396 COA1Q9GZY4 146 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 TMX4Q9H1E5 349 aaPredicted RBP7.25□□□□□ -1.25
SSX3-201ENST00000298396 ZNRF3Q9ULT6 936 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 JAG2Q9Y219 1238 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 AKAP2Q9Y2D5 859 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 GTF3C3Q9Y5Q9 886 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 NDUFB9Q9Y6M9 179 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 MYH1P12882 1939 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 FAM205AQ6ZU69 1335 aa7.25□□□□□ -1.25
SSX3-201ENST00000298396 POTECB2RU33 542 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 RAD17O75943 681 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 VIL1P09327 827 aaKnown RBP7.24□□□□□ -1.25
SSX3-201ENST00000298396 HIBADHP31937 336 aaKnown RBP7.24□□□□□ -1.25
SSX3-201ENST00000298396 RASGRF1Q13972 1273 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 DACT2Q5SW24 774 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 ANKRD45Q5TZF3 282 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 ERICH6BQ5W0A0 696 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 ZNF804AQ7Z570 1209 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 ZNF516Q92618 1163 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 SYMPKQ92797 1274 aaKnown RBP7.24□□□□□ -1.25
SSX3-201ENST00000298396 GMLQ99445 158 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms