RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 FAM208AQ9UK61 1670 aaKnown RBP16.95■□□□□ 0.3
SPIDR-201ENST00000297423 PHLPP2Q6ZVD8 1323 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 SOWAHDA6NJG2 315 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 SASH1O94885 1247 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 DNA2P51530 1060 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 POLA2Q14181 598 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 GUCA1BQ9UMX6 200 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 ZRANB2O95218 330 aaKnown RBP eCLIP16.95■□□□□ 0.3
SPIDR-201ENST00000297423 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 AIFM3Q96NN9 605 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 POLD4Q9HCU8 107 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 RRP12Q5JTH9 1297 aaKnown RBP16.94■□□□□ 0.3
SPIDR-201ENST00000297423 RBM43Q6ZSC3 357 aaKnown RBP16.94■□□□□ 0.3
SPIDR-201ENST00000297423 ASAP1Q9ULH1 1129 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 A0A087WZG4 1122 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
SPIDR-201ENST00000297423 PDIA6Q15084 440 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 UBE3BQ7Z3V4 1068 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 FMR1NBQ8N0W7 255 aaPredicted RBP16.94■□□□□ 0.3
SPIDR-201ENST00000297423 RIN2Q8WYP3 895 aaPredicted RBP16.94■□□□□ 0.3
SPIDR-201ENST00000297423 RABGGTAQ92696 567 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 SECISBP2LQ93073 1101 aaKnown RBP16.94■□□□□ 0.3
SPIDR-201ENST00000297423 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
SPIDR-201ENST00000297423 TIMM10P62072 90 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 CPLX2Q6PUV4 134 aaKnown RBP16.93■□□□□ 0.3
SPIDR-201ENST00000297423 PPM1EQ8WY54 764 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 CDC5LQ99459 802 aaKnown RBP16.93■□□□□ 0.3
SPIDR-201ENST00000297423 CTAGE9A4FU28 777 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 CCT5P48643 541 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 ANO1Q5XXA6 986 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 PIGBQ92521 554 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 MYCBPQ99417 103 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-201ENST00000297423 FUT8Q9BYC5 575 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 CCT6AP40227 531 aaKnown RBP16.93■□□□□ 0.3
SPIDR-201ENST00000297423 RNF187Q5TA31 235 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-201ENST00000297423 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 PACS2Q86VP3 889 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 RASSF8Q8NHQ8 419 aa16.93■□□□□ 0.3
SPIDR-201ENST00000297423 VWA3AA6NCI4 1184 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-201ENST00000297423 NAA16Q6N069 864 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-201ENST00000297423 DNAJC10Q8IXB1 793 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 NEURL1BA8MQ27 555 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 ENC1O14682 589 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 RDXP35241 583 aaKnown RBP16.92■□□□□ 0.3
SPIDR-201ENST00000297423 TSR1Q2NL82 804 aaKnown RBP16.92■□□□□ 0.3
SPIDR-201ENST00000297423 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 STAMQ92783 540 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 PHKBQ93100 1093 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 SAMM50Q9Y512 469 aa16.92■□□□□ 0.3
SPIDR-201ENST00000297423 ZEB2O60315 1214 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 ATP2C2O75185 946 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 CCDC93Q567U6 631 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 LINC00301Q8NCQ3 95 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 PCDHA5Q9Y5H7 936 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 NHSL1Q5SYE7 1610 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 GOLGA6L9A6NEM1 432 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 GCKRQ14397 625 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 REXO1L1PQ8IX06 675 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 AFAP1L1Q8TED9 768 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 ALG1Q9BT22 464 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 FOXN1O15353 648 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 TUBB4AP04350 444 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
SPIDR-201ENST00000297423 GSPT2Q8IYD1 628 aaKnown RBP16.9■□□□□ 0.3
SPIDR-201ENST00000297423 THRAP3Q9Y2W1 955 aaKnown RBP16.9■□□□□ 0.3
SPIDR-201ENST00000297423 KIAA0754O94854 1291 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.39e-19■■■■■ 36
SPIDR-201ENST00000297423 CASP8Q14790 479 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 MUM1L1Q5H9M0 696 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 SLC35F6Q8N357 371 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 CEP112Q8N8E3 955 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 MYL10Q9BUA6 226 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 CCDC151A5D8V7 595 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 PFKFB2O60825 505 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
SPIDR-201ENST00000297423 MAGEA9P43362 315 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 NCAPH2Q6IBW4 605 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 CCDC148Q8NFR7 591 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 FAM212AQ96EL1 285 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 GBP3Q9H0R5 595 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 CACNA1FO60840 1977 aa16.9■□□□□ 0.3
SPIDR-201ENST00000297423 A0A0U1RQJ8 604 aa16.89■□□□□ 0.3
SPIDR-201ENST00000297423 ERLIN2O94905 339 aa16.89■□□□□ 0.3
SPIDR-201ENST00000297423 PDIA3P30101 505 aaKnown RBP16.89■□□□□ 0.3
SPIDR-201ENST00000297423 SLC20A2Q08357 652 aa16.89■□□□□ 0.3
SPIDR-201ENST00000297423 STOX1Q6ZVD7 989 aa16.89■□□□□ 0.3
SPIDR-201ENST00000297423 ENGASEQ8NFI3 743 aa16.89■□□□□ 0.3
SPIDR-201ENST00000297423 ATRIPQ8WXE1 791 aa16.89■□□□□ 0.3
SPIDR-201ENST00000297423 SAMSN1Q9NSI8 373 aaKnown RBP16.89■□□□□ 0.3
SPIDR-201ENST00000297423 EBAG9O00559 213 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms