RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 MAP3K7CLP57077 242 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 TTC22Q5TAA0 569 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 PHACTR1Q9C0D0 580 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 CPP00450 1065 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
SNIP1-201ENST00000296215 DHX58Q96C10 678 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 MPP4Q96JB8 637 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 HDAC6Q9UBN7 1215 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 RTN3O95197 1032 aaPredicted RBP13.1□□□□□ -0.31
SNIP1-201ENST00000296215 BASP1P80723 227 aaKnown RBP13.1□□□□□ -0.31
SNIP1-201ENST00000296215 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 GORASP1Q9BQQ3 440 aa13.1□□□□□ -0.31
SNIP1-201ENST00000296215 CASQ2O14958 399 aaPredicted RBP13.09□□□□□ -0.31
SNIP1-201ENST00000296215 KRT86O43790 486 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 ARPC4P59998 168 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 FANCCQ00597 558 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 TMEM154Q6P9G4 183 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
SNIP1-201ENST00000296215 STMN4Q9H169 189 aaPredicted RBP13.09□□□□□ -0.31
SNIP1-201ENST00000296215 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNIP1-201ENST00000296215 TTF2Q9UNY4 1162 aaKnown RBP13.09□□□□□ -0.31
SNIP1-201ENST00000296215 MLH1P40692 756 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 PPP1R21Q6ZMI0 780 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 CUL5Q93034 780 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 KRT75O95678 551 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 PHBP35232 272 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 ZC3H12AQ5D1E8 599 aaKnown RBP13.09□□□□□ -0.31
SNIP1-201ENST00000296215 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 CHGBP05060 677 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 IRAK1P51617 712 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 NME8Q8N427 588 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 MAF1Q9H063 256 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 NLRP2Q9NX02 1062 aa13.09□□□□□ -0.31
SNIP1-201ENST00000296215 P4HA2O15460 535 aa13.08□□□□□ -0.31
SNIP1-201ENST00000296215 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.31
SNIP1-201ENST00000296215 TAOK1Q7L7X3 1001 aa13.08□□□□□ -0.31
SNIP1-201ENST00000296215 UBE2Q1Q7Z7E8 422 aa13.08□□□□□ -0.31
SNIP1-201ENST00000296215 UBLCP1Q8WVY7 318 aaPredicted RBP13.08□□□□□ -0.31
SNIP1-201ENST00000296215 THEGQ9P2T0 379 aa13.08□□□□□ -0.31
SNIP1-201ENST00000296215 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.31
SNIP1-201ENST00000296215 SCINQ9Y6U3 715 aa13.08□□□□□ -0.31
SNIP1-201ENST00000296215 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 MPP3Q13368 585 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 C8orf74Q6P047 294 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 ST13P4Q8IZP2 240 aaPredicted RBP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 GFAPP14136 432 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 RASSF2P50749 326 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 MCUR1Q96AQ8 359 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 SCNN1BP51168 640 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 ZBTB16Q05516 673 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 IL16Q14005 1332 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 IFT20Q8IY31 132 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 RRP36Q96EU6 259 aaKnown RBP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 PARVBQ9HBI1 364 aa13.08□□□□□ -0.32
SNIP1-201ENST00000296215 A1CFQ9NQ94 594 aaKnown RBP13.08□□□□□ -0.32
SNIP1-201ENST00000296215 AKR1B15C9JRZ8 316 aaPredicted RBP13.07□□□□□ -0.32
SNIP1-201ENST00000296215 PDHBP11177 359 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 ATP2A2P16615 1042 aaKnown RBP13.07□□□□□ -0.32
SNIP1-201ENST00000296215 SKOR1P84550 965 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 APBA1Q02410 837 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 PSME1Q06323 249 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 ZC3H18Q86VM9 953 aaKnown RBP13.07□□□□□ -0.32
SNIP1-201ENST00000296215 NOD2Q9HC29 1040 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 N4BP3O15049 544 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 ANP32DO95626 131 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 TRIM27P14373 513 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 GGCXP38435 758 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 NNTQ13423 1086 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 PLCB4Q15147 1175 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 EIF2AQ9BY44 585 aaKnown RBP13.07□□□□□ -0.32
SNIP1-201ENST00000296215 DLGAP2Q9P1A6 1054 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 MACROD2A1Z1Q3 448 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 USP5P45974 858 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 CCDC13Q8IYE1 715 aa13.07□□□□□ -0.32
SNIP1-201ENST00000296215 GFM2Q969S9 779 aaKnown RBP13.07□□□□□ -0.32
SNIP1-201ENST00000296215 TARSL2A2RTX5 802 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 SDSP20132 328 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 LZTS2Q9BRK4 669 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 FUT8Q9BYC5 575 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 ZNF232Q9UNY5 417 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 PAK2Q13177 524 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 FCHSD1Q86WN1 690 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 P3H4Q92791 437 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 SPATA7Q9P0W8 599 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms