RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 CEP57L1Q8IYX8 460 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 ENGASEQ8NFI3 743 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 OSBPL5Q9H0X9 879 aaPredicted RBP17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 ZSCAN16Q9H4T2 348 aaPredicted RBP17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 FEZ2Q9UHY8 353 aaPredicted RBP17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 SLC5A1P13866 664 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 CCDC73Q6ZRK6 1079 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 DSCC1Q9BVC3 393 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 RCOR1Q9UKL0 485 aa17.66■□□□□ 0.42
LRRTM1-201ENST00000295057 SEC31AO94979 1220 aaKnown RBP17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 SMC2O95347 1197 aa17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 GPAA1O43292 621 aa17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 FSIP1Q8NA03 581 aa17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 SPATA5Q8NB90 893 aa17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 IFNKQ9P0W0 207 aa17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 LRP5O75197 1615 aa17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 SPEF2Q9C093 1822 aa17.65■□□□□ 0.42
LRRTM1-201ENST00000295057 NHSQ6T4R5 1651 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 TRIM37O94972 964 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 ZRANB2O95218 330 aaKnown RBP eCLIP17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 APPBP2Q92624 585 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 EPC1Q9H2F5 836 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 AKAP11Q9UKA4 1901 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 ZNF532Q9HCE3 1301 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 BCORQ6W2J9 1755 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 E7EWF7 191 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 FANCGO15287 622 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 FGAP02671 866 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 ADD2P35612 726 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 GYG1P46976 350 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 GUCY1B3Q02153 619 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 FAM160A1Q05DH4 1040 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 RAD51AP2Q09MP3 1159 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 DPCR1Q3MIW9 517 aa17.64■□□□□ 0.41
LRRTM1-201ENST00000295057 RFC4P35249 363 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 ME1P48163 572 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 ST5P78524 1137 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 CERS3Q8IU89 383 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 ANKRD18AQ8IVF6 992 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 DNAI1Q9UI46 699 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 KRT32Q14532 448 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 HOMER1Q86YM7 354 aa17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 ZNF512BQ96KM6 892 aaPredicted RBP17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 ZCCHC17Q9NP64 241 aaKnown RBP17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 GPHNQ9NQX3 736 aaPredicted RBP17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 ORC3Q9UBD5 711 aaPredicted RBP17.63■□□□□ 0.41
LRRTM1-201ENST00000295057 PDE6AP16499 860 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 SFPQP23246 707 aaKnown RBP eCLIP17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 KLRK1P26718 216 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 IMPACTQ9P2X3 320 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 DENND2AQ9ULE3 1009 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 MYO5AQ9Y4I1 1855 aaKnown RBP17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 A0A1B0GVL5 298 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 ZFYP08048 801 aaPredicted RBP17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 TMCO3Q6UWJ1 677 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 MINPP1Q9UNW1 487 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
LRRTM1-201ENST00000295057 PSDA5PKW4 1024 aaPredicted RBP17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 CTDNEP1O95476 244 aa17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 UQCRFS1P1P0C7P4 283 aa17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 MAGEB6Q8N7X4 407 aa17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 UBXN4Q92575 508 aa17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 BIN1O00499 593 aa17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 ILDR1Q86SU0 546 aaPredicted RBP17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 SMARCC2Q8TAQ2 1214 aa17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 SDF4Q9BRK5 362 aa17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 NAT10Q9H0A0 1025 aaKnown RBP17.61■□□□□ 0.41
LRRTM1-201ENST00000295057 TCRBV5S4A2TA0A5A2 114 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 CCDC150Q8NCX0 1101 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 SMARCE1Q969G3 411 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 MYH15Q9Y2K3 1946 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 SASH3O75995 380 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 ETF1P62495 437 aaKnown RBP17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 CCT2P78371 535 aaKnown RBP17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 APOBRQ0VD83 1088 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 NFIXQ14938 502 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 SLC10A5Q5PT55 438 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 FMR1NBQ8N0W7 255 aaPredicted RBP17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 NLRP3Q96P20 1036 aa17.6■□□□□ 0.41
LRRTM1-201ENST00000295057 PTPDC1A2A3K4 754 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 APPP05067 770 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 NDUFA8P51970 172 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 TTF1Q15361 905 aaPredicted RBP17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 LRRFIP1Q32MZ4 808 aaKnown RBP17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 TPTE2Q6XPS3 522 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 PCDHA7Q9UN72 937 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms