RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ZBED9Q6R2W3 1325 aa31.14■■■□□ 2.58
U2AF1-201ENST00000291552 CDK5RAP2Q96SN8 1893 aa31.14■■■□□ 2.58
U2AF1-201ENST00000291552 SLURP2P0DP57 97 aa31.13■■■□□ 2.57
U2AF1-201ENST00000291552 ATP8B2P98198 1209 aa31.13■■■□□ 2.57
U2AF1-201ENST00000291552 ERICH6Q7L0X2 663 aa31.13■■■□□ 2.57
U2AF1-201ENST00000291552 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.13■■■□□ 2.57
U2AF1-201ENST00000291552 EFCC1Q9HA90 598 aa31.13■■■□□ 2.57
U2AF1-201ENST00000291552 KCNH4Q9UQ05 1017 aa31.13■■■□□ 2.57
U2AF1-201ENST00000291552 DDTLA6NHG4 134 aaPredicted RBP31.12■■■□□ 2.57
U2AF1-201ENST00000291552 PHF20L1A8MW92 1017 aa31.12■■■□□ 2.57
U2AF1-201ENST00000291552 RHBDL3P58872 404 aa31.12■■■□□ 2.57
U2AF1-201ENST00000291552 MOGSQ13724 837 aa31.12■■■□□ 2.57
U2AF1-201ENST00000291552 GORABQ5T7V8 394 aa31.12■■■□□ 2.57
U2AF1-201ENST00000291552 SLF2Q8IX21 1173 aa31.12■■■□□ 2.57
U2AF1-201ENST00000291552 ZCCHC17Q9NP64 241 aaKnown RBP31.12■■■□□ 2.57
U2AF1-201ENST00000291552 GPR75-ASB3A0A0A6YYF3 556 aa31.11■■■□□ 2.57
U2AF1-201ENST00000291552 ITPRIPQ8IWB1 547 aa31.11■■■□□ 2.57
U2AF1-201ENST00000291552 FTSJ3Q8IY81 847 aaKnown RBP31.11■■■□□ 2.57
U2AF1-201ENST00000291552 NSUN4Q96CB9 384 aaKnown RBP31.11■■■□□ 2.57
U2AF1-201ENST00000291552 ZBTB7BO15156 539 aaPredicted RBP31.1■■■□□ 2.57
U2AF1-201ENST00000291552 GPR108Q9NPR9 543 aa31.1■■■□□ 2.57
U2AF1-201ENST00000291552 TLR2O60603 784 aa31.09■■■□□ 2.57
U2AF1-201ENST00000291552 MAP3K10Q02779 954 aa31.09■■■□□ 2.57
U2AF1-201ENST00000291552 PICALMQ13492 652 aa31.09■■■□□ 2.57
U2AF1-201ENST00000291552 TNNI3KQ59H18 835 aa31.09■■■□□ 2.57
U2AF1-201ENST00000291552 FPGT-TNNI3KV9GXZ4 949 aa31.09■■■□□ 2.57
U2AF1-201ENST00000291552 SIPA1L1O43166 1804 aa31.09■■■□□ 2.57
U2AF1-201ENST00000291552 BRCA2P51587 3418 aa31.09■■■□□ 2.57
U2AF1-201ENST00000291552 FOCADQ5VW36 1801 aa31.08■■■□□ 2.57
U2AF1-201ENST00000291552 ATAD5Q96QE3 1844 aa31.08■■■□□ 2.57
U2AF1-201ENST00000291552 DBNDD2Q9BQY9 259 aa31.08■■■□□ 2.57
U2AF1-201ENST00000291552 ADGRA2Q96PE1 1338 aa31.07■■■□□ 2.56
U2AF1-201ENST00000291552 ARHGAP39Q9C0H5 1083 aa31.07■■■□□ 2.56
U2AF1-201ENST00000291552 UQCRFS1P1P0C7P4 283 aa31.06■■■□□ 2.56
U2AF1-201ENST00000291552 ANKRD23Q86SG2 305 aa31.06■■■□□ 2.56
U2AF1-201ENST00000291552 ZSCAN29Q8IWY8 852 aaPredicted RBP31.06■■■□□ 2.56
U2AF1-201ENST00000291552 RAI14Q9P0K7 980 aa31.06■■■□□ 2.56
U2AF1-201ENST00000291552 NOP58Q9Y2X3 529 aaKnown RBP31.06■■■□□ 2.56
U2AF1-201ENST00000291552 SURF6O75683 361 aaKnown RBP31.05■■■□□ 2.56
U2AF1-201ENST00000291552 SCYL3Q8IZE3 742 aa31.05■■■□□ 2.56
U2AF1-201ENST00000291552 ARMC5Q96C12 935 aa31.05■■■□□ 2.56
U2AF1-201ENST00000291552 SNRKQ9NRH2 765 aa31.05■■■□□ 2.56
U2AF1-201ENST00000291552 COL2A1P02458 1487 aaPredicted RBP31.05■■■□□ 2.56
U2AF1-201ENST00000291552 MKI67P46013 3256 aaKnown RBP31.05■■■□□ 2.56
U2AF1-201ENST00000291552 OS9Q13438 667 aaPredicted RBP31.04■■■□□ 2.56
U2AF1-201ENST00000291552 POTEFA5A3E0 1075 aa31.03■■■□□ 2.56
U2AF1-201ENST00000291552 NPM3O75607 178 aaKnown RBP31.03■■■□□ 2.56
U2AF1-201ENST00000291552 GSTO1P78417 241 aa31.03■■■□□ 2.56
U2AF1-201ENST00000291552 PANK1Q8TE04 598 aa31.03■■■□□ 2.56
U2AF1-201ENST00000291552 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.03■■■□□ 2.56
U2AF1-201ENST00000291552 PTCH2Q9Y6C5 1203 aa31.03■■■□□ 2.56
U2AF1-201ENST00000291552 MGAMO43451 1857 aa31.03■■■□□ 2.56
U2AF1-201ENST00000291552 PDHXO00330 501 aa31.02■■■□□ 2.56
U2AF1-201ENST00000291552 LDHCP07864 332 aa31.02■■■□□ 2.56
U2AF1-201ENST00000291552 PTPRAP18433 802 aa31.02■■■□□ 2.56
U2AF1-201ENST00000291552 LACTBP83111 547 aaPredicted RBP31.02■■■□□ 2.56
U2AF1-201ENST00000291552 GPAT2Q6NUI2 795 aa31.02■■■□□ 2.56
U2AF1-201ENST00000291552 C17orf99Q6UX52 265 aa31.02■■■□□ 2.56
U2AF1-201ENST00000291552 TLR7Q9NYK1 1049 aaKnown RBP31.02■■■□□ 2.56
U2AF1-201ENST00000291552 TTC39AQ5SRH9 613 aa31.01■■■□□ 2.55
U2AF1-201ENST00000291552 CEP85Q6P2H3 762 aa31.01■■■□□ 2.55
U2AF1-201ENST00000291552 DBNLQ9UJU6 430 aaKnown RBP31.01■■■□□ 2.55
U2AF1-201ENST00000291552 FAM196BA6NMK8 535 aa31■■■□□ 2.55
U2AF1-201ENST00000291552 CXCL11O14625 94 aa31■■■□□ 2.55
U2AF1-201ENST00000291552 CTGFP29279 349 aa31■■■□□ 2.55
U2AF1-201ENST00000291552 LRP2BPQ9P2M1 347 aa31■■■□□ 2.55
U2AF1-201ENST00000291552 CPA4Q9UI42 421 aa31■■■□□ 2.55
U2AF1-201ENST00000291552 ZHX2Q9Y6X8 837 aa31■■■□□ 2.55
U2AF1-201ENST00000291552 MAP4K4O95819 1239 aaPredicted RBP30.99■■■□□ 2.55
U2AF1-201ENST00000291552 CYP2E1P05181 493 aaPredicted RBP30.99■■■□□ 2.55
U2AF1-201ENST00000291552 OSBPL5Q9H0X9 879 aaPredicted RBP30.99■■■□□ 2.55
U2AF1-201ENST00000291552 AFG3L2Q9Y4W6 797 aa30.99■■■□□ 2.55
U2AF1-201ENST00000291552 LOC285556D6RIA3 1793 aa30.98■■■□□ 2.55
U2AF1-201ENST00000291552 A0A0G2JLL6 359 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-201ENST00000291552 CCDC158Q5M9N0 1113 aa30.98■■■□□ 2.55
U2AF1-201ENST00000291552 PRRT2Q7Z6L0 340 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-201ENST00000291552 ADGRA1Q86SQ6 560 aa30.98■■■□□ 2.55
U2AF1-201ENST00000291552 CCDC84Q86UT8 332 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-201ENST00000291552 SH3RF3Q8TEJ3 882 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-201ENST00000291552 EAF2Q96CJ1 260 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-201ENST00000291552 ZNF512BQ96KM6 892 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-201ENST00000291552 PICK1Q9NRD5 415 aa30.98■■■□□ 2.55
U2AF1-201ENST00000291552 TBC1D12O60347 775 aa30.97■■■□□ 2.55
U2AF1-201ENST00000291552 CTNND1O60716 968 aaKnown RBP30.97■■■□□ 2.55
U2AF1-201ENST00000291552 TEX11Q8IYF3 940 aa30.97■■■□□ 2.55
U2AF1-201ENST00000291552 ZNF333Q96JL9 665 aa30.97■■■□□ 2.55
U2AF1-201ENST00000291552 ZAP70P43403 619 aa30.96■■■□□ 2.55
U2AF1-201ENST00000291552 ARHGEF6Q15052 776 aa30.96■■■□□ 2.55
U2AF1-201ENST00000291552 CCDC8Q9H0W5 538 aaPredicted RBP30.96■■■□□ 2.55
U2AF1-201ENST00000291552 PIH1D3Q9NQM4 214 aaKnown RBP30.96■■■□□ 2.55
U2AF1-201ENST00000291552 NAA16Q6N069 864 aaPredicted RBP30.95■■■□□ 2.55
U2AF1-201ENST00000291552 ECM2O94769 699 aaPredicted RBP30.94■■■□□ 2.54
U2AF1-201ENST00000291552 CYP2C8P10632 490 aa30.94■■■□□ 2.54
U2AF1-201ENST00000291552 RRP1BQ14684 758 aaKnown RBP30.94■■■□□ 2.54
U2AF1-201ENST00000291552 AATFQ9NY61 560 aaKnown RBP eCLIP30.94■■■□□ 2.54
U2AF1-201ENST00000291552 EXOC6BQ9Y2D4 811 aa30.94■■■□□ 2.54
U2AF1-201ENST00000291552 KIF22Q14807 665 aa30.93■■■□□ 2.54
U2AF1-201ENST00000291552 TRIM47Q96LD4 638 aa30.93■■■□□ 2.54
U2AF1-201ENST00000291552 PARK7Q99497 189 aaKnown RBP30.93■■■□□ 2.54
U2AF1-201ENST00000291552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms