RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 DTNBO60941 627 aa13.58□□□□□ -0.24
CHRNB3-201ENST00000289957 USP17L8P0C7I0 530 aa13.58□□□□□ -0.24
CHRNB3-201ENST00000289957 CUL4AQ13619 759 aa13.58□□□□□ -0.24
CHRNB3-201ENST00000289957 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.24
CHRNB3-201ENST00000289957 PATL2C9JE40 543 aaKnown RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 DDNO94850 711 aaPredicted RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 MCCP23508 829 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 GMPSP49915 693 aaPredicted RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 PICALMQ13492 652 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 CFAP100Q494V2 611 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 RBM26Q5T8P6 1007 aaKnown RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 CDC42EP5Q6NZY7 148 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 CHST3Q7LGC8 479 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 TDRD3Q9H7E2 651 aaKnown RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 DCP1AQ9NPI6 582 aaPredicted RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 CLRN2A0PK11 232 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 HS1BP3Q53T59 392 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 SAMD7Q7Z3H4 446 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 TRIM44Q96DX7 344 aaPredicted RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 TIAM2Q8IVF5 1701 aa13.57□□□□□ -0.24
CHRNB3-201ENST00000289957 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 NASPP49321 788 aaPredicted RBP13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 NBPF9Q3BBW0 867 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 LRRC2Q9BYS8 371 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 VPS33BQ9H267 617 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 MINDY4BA8MYZ0 360 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 WDHD1O75717 1129 aaPredicted RBP13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 TDO2P48775 406 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 CTR9Q6PD62 1173 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 CDAN1Q8IWY9 1227 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 FAM163AQ96GL9 167 aaPredicted RBP13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 JAKMIP1Q96N16 626 aaKnown RBP13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 NAPBQ9H115 298 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 USP40Q9NVE5 1235 aa13.56□□□□□ -0.24
CHRNB3-201ENST00000289957 USP17L12C9JPN9 530 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 USP17L21D6R901 530 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 PLCD1P51178 756 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 GSTO1P78417 241 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 TCP10Q12799 353 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 FLT1P17948 1338 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 NEDD4P46934 1319 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 PRDM1O75626 825 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 PPP4CP60510 307 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 TBC1D10BQ4KMP7 808 aaPredicted RBP13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 KCNB2Q92953 911 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 GPHNQ9NQX3 736 aaPredicted RBP13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
CHRNB3-201ENST00000289957 LAMA4Q16363 1823 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 E7EWF7 191 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 MBD3O95983 291 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 EPS15P42566 896 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 USP5P45974 858 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 FKBP1AP62942 108 aaKnown RBP13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 HHIPL2Q6UWX4 724 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 SLC44A5Q8NCS7 719 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 ANP32BQ92688 251 aaKnown RBP13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 DYNLL2Q96FJ2 89 aa13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
CHRNB3-201ENST00000289957 ZSCAN23Q3MJ62 389 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 DLK2Q6UY11 383 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 FAM196BA6NMK8 535 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 BRD1O95696 1058 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 BAG3O95817 575 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 LDHCP07864 332 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 NEK4P51957 841 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 TRPM4Q8TD43 1214 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 FAM198AQ9UFP1 575 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 ECM29Q5VYK3 1845 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 PCNTO95613 3336 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
CHRNB3-201ENST00000289957 WNT10BO00744 389 aa13.52□□□□□ -0.24
CHRNB3-201ENST00000289957 AGBL3Q8NEM8 1001 aa13.52□□□□□ -0.24
CHRNB3-201ENST00000289957 MYOZ2Q9NPC6 264 aa13.52□□□□□ -0.24
CHRNB3-201ENST00000289957 DDX60LQ5H9U9 1706 aaKnown RBP13.52□□□□□ -0.25
CHRNB3-201ENST00000289957 TCP10L2B9ZVM9 353 aa13.52□□□□□ -0.25
CHRNB3-201ENST00000289957 ZNF213O14771 459 aa13.52□□□□□ -0.25
CHRNB3-201ENST00000289957 PPARAQ07869 468 aa13.52□□□□□ -0.25
CHRNB3-201ENST00000289957 TNIP1Q15025 636 aa13.52□□□□□ -0.25
CHRNB3-201ENST00000289957 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.25
CHRNB3-201ENST00000289957 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms