RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 BAZ2AQ9UIF9 1905 aaKnown RBP22.47■■□□□ 1.19
BRAF-201ENST00000288602 NSUN4Q96CB9 384 aaKnown RBP22.47■■□□□ 1.19
BRAF-201ENST00000288602 ANKRD2Q9GZV1 360 aa22.47■■□□□ 1.19
BRAF-201ENST00000288602 KIF23Q02241 960 aaPredicted RBP22.46■■□□□ 1.19
BRAF-201ENST00000288602 GPR101Q96P66 508 aaPredicted RBP22.46■■□□□ 1.19
BRAF-201ENST00000288602 AATFQ9NY61 560 aaKnown RBP eCLIP22.46■■□□□ 1.19
BRAF-201ENST00000288602 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.46■■□□□ 1.19
BRAF-201ENST00000288602 ANKIB1Q9P2G1 1089 aa22.46■■□□□ 1.19
BRAF-201ENST00000288602 TRPC5Q9UL62 973 aaPredicted RBP22.46■■□□□ 1.19
BRAF-201ENST00000288602 PCDHA7Q9UN72 937 aa22.46■■□□□ 1.19
BRAF-201ENST00000288602 AP5Z1O43299 807 aa22.46■■□□□ 1.19
BRAF-201ENST00000288602 ONECUT3O60422 494 aaPredicted RBP22.46■■□□□ 1.19
BRAF-201ENST00000288602 PRDM1O75626 825 aa22.46■■□□□ 1.19
BRAF-201ENST00000288602 ADCY5O95622 1261 aa22.46■■□□□ 1.19
BRAF-201ENST00000288602 IARSP41252 1262 aaKnown RBP22.46■■□□□ 1.19
BRAF-201ENST00000288602 WTAPQ15007 396 aa22.46■■□□□ 1.19
BRAF-201ENST00000288602 CNBD1Q8NA66 436 aa22.46■■□□□ 1.19
BRAF-201ENST00000288602 MYSM1Q5VVJ2 828 aa22.45■■□□□ 1.18
BRAF-201ENST00000288602 CERKQ8TCT0 537 aa22.45■■□□□ 1.18
BRAF-201ENST00000288602 SLC26A6Q9BXS9 759 aa22.45■■□□□ 1.18
BRAF-201ENST00000288602 TIAM2Q8IVF5 1701 aa22.45■■□□□ 1.18
BRAF-201ENST00000288602 CDKL5O76039 1030 aa22.45■■□□□ 1.18
BRAF-201ENST00000288602 KRT40Q6A162 431 aa22.45■■□□□ 1.18
BRAF-201ENST00000288602 BCL11BQ9C0K0 894 aaPredicted RBP22.45■■□□□ 1.18
BRAF-201ENST00000288602 MSNP26038 577 aaKnown RBP22.44■■□□□ 1.18
BRAF-201ENST00000288602 SNW1Q13573 536 aaKnown RBP22.44■■□□□ 1.18
BRAF-201ENST00000288602 ANO6Q4KMQ2 910 aa22.44■■□□□ 1.18
BRAF-201ENST00000288602 ATL3Q6DD88 541 aa22.44■■□□□ 1.18
BRAF-201ENST00000288602 CPLX2Q6PUV4 134 aaKnown RBP22.44■■□□□ 1.18
BRAF-201ENST00000288602 LINC00301Q8NCQ3 95 aa22.44■■□□□ 1.18
BRAF-201ENST00000288602 QTRT2Q9H974 415 aaKnown RBP22.44■■□□□ 1.18
BRAF-201ENST00000288602 RTEL1Q9NZ71 1219 aa22.44■■□□□ 1.18
BRAF-201ENST00000288602 MYH13Q9UKX3 1938 aa22.44■■□□□ 1.18
BRAF-201ENST00000288602 PTMAP06454 111 aaKnown RBP22.43■■□□□ 1.18
BRAF-201ENST00000288602 GUCY1A2P33402 732 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 LUZP1Q86V48 1076 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 NUP133Q8WUM0 1156 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 ERICH2A1L162 156 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 SART3Q15020 963 aaKnown RBP22.43■■□□□ 1.18
BRAF-201ENST00000288602 STK38Q15208 465 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 SLC4A8Q2Y0W8 1093 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 SYNE3Q6ZMZ3 975 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 RBM43Q6ZSC3 357 aaKnown RBP22.43■■□□□ 1.18
BRAF-201ENST00000288602 FSIP1Q8NA03 581 aa22.43■■□□□ 1.18
BRAF-201ENST00000288602 RNF41Q9H4P4 317 aaPredicted RBP22.43■■□□□ 1.18
BRAF-201ENST00000288602 ERCC4Q92889 916 aaPredicted RBP22.42■■□□□ 1.18
BRAF-201ENST00000288602 A0A087WWV3 80 aa22.42■■□□□ 1.18
BRAF-201ENST00000288602 A0A1B0GVL5 298 aa22.42■■□□□ 1.18
BRAF-201ENST00000288602 SF3A1Q15459 793 aaKnown RBP22.42■■□□□ 1.18
BRAF-201ENST00000288602 PRR5LQ6MZQ0 368 aa22.42■■□□□ 1.18
BRAF-201ENST00000288602 UBAC1Q9BSL1 405 aa22.42■■□□□ 1.18
BRAF-201ENST00000288602 NOL7Q9UMY1 257 aaKnown RBP22.42■■□□□ 1.18
BRAF-201ENST00000288602 USP17L12C9JPN9 530 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 USP17L21D6R901 530 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 SEMA3EO15041 775 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 HS1BP3Q53T59 392 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 CTR9Q6PD62 1173 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 CCDC73Q6ZRK6 1079 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 BRAPQ7Z569 592 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 MYH2Q9UKX2 1941 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 TRIM37O94972 964 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 SSRP1Q08945 709 aaKnown RBP22.41■■□□□ 1.18
BRAF-201ENST00000288602 GRAPQ13588 217 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 SASS6Q6UVJ0 657 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
BRAF-201ENST00000288602 CCDC39Q9UFE4 941 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 TNKSO95271 1327 aa22.41■■□□□ 1.18
BRAF-201ENST00000288602 GNL2Q13823 731 aaKnown RBP22.4■■□□□ 1.18
BRAF-201ENST00000288602 ENGASEQ8NFI3 743 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 FAM200AQ8TCP9 573 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 DNAJC25Q9H1X3 360 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 ECM29Q5VYK3 1845 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 GYS1P13807 737 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 RTN1Q16799 776 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 ESR2Q92731 530 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 POLR3EQ9NVU0 708 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 ANAPC4Q9UJX5 808 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 IRS2Q9Y4H2 1338 aa22.4■■□□□ 1.18
BRAF-201ENST00000288602 SPTLC2O15270 562 aa22.39■■□□□ 1.18
BRAF-201ENST00000288602 ZNF654Q8IZM8 581 aa22.39■■□□□ 1.18
BRAF-201ENST00000288602 BRIP1Q9BX63 1249 aa22.39■■□□□ 1.18
BRAF-201ENST00000288602 CBX8Q9HC52 389 aa22.39■■□□□ 1.18
BRAF-201ENST00000288602 MARCKSP29966 332 aaPredicted RBP22.39■■□□□ 1.17
BRAF-201ENST00000288602 FAM160A1Q05DH4 1040 aa22.39■■□□□ 1.17
BRAF-201ENST00000288602 ANO1Q5XXA6 986 aa22.39■■□□□ 1.17
BRAF-201ENST00000288602 ADALQ6DHV7 355 aa22.39■■□□□ 1.17
BRAF-201ENST00000288602 ZNF830Q96NB3 372 aaPredicted RBP22.39■■□□□ 1.17
BRAF-201ENST00000288602 GOLGB1Q14789 3259 aaKnown RBP22.39■■□□□ 1.17
BRAF-201ENST00000288602 FMNL1O95466 1100 aaPredicted RBP22.38■■□□□ 1.17
BRAF-201ENST00000288602 NDUFA8P51970 172 aa22.38■■□□□ 1.17
BRAF-201ENST00000288602 KINO60870 393 aaKnown RBP22.38■■□□□ 1.17
BRAF-201ENST00000288602 CYP2D6P10635 497 aa22.38■■□□□ 1.17
BRAF-201ENST00000288602 SEC23AQ15436 765 aa22.38■■□□□ 1.17
BRAF-201ENST00000288602 ENAHQ8N8S7 591 aaPredicted RBP22.38■■□□□ 1.17
BRAF-201ENST00000288602 KCNJ14Q9UNX9 436 aa22.38■■□□□ 1.17
BRAF-201ENST00000288602 IFNAR1P17181 557 aa22.37■■□□□ 1.17
BRAF-201ENST00000288602 TRIM29Q14134 588 aa22.37■■□□□ 1.17
BRAF-201ENST00000288602 GRIK5Q16478 980 aa22.37■■□□□ 1.17
BRAF-201ENST00000288602 FANCBQ8NB91 859 aa22.37■■□□□ 1.17
BRAF-201ENST00000288602 MRPS27Q92552 414 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms