RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 CYP4F22Q6NT55 531 aa24.03■■□□□ 1.44
TIMP4-201ENST00000287814 SLURP2P0DP57 97 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 MAP3K11Q16584 847 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 MAPKAPK5Q8IW41 473 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 HHIPL1Q96JK4 782 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 PCNTO95613 3336 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 PPP1R12BO60237 982 aaPredicted RBP24.02■■□□□ 1.44
TIMP4-201ENST00000287814 LDLRAD1Q5T700 205 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 ZSCAN25Q6NSZ9 544 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 MIGA2Q7L4E1 593 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 ARMC9Q7Z3E5 817 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 LCORLQ8N3X6 602 aa24.02■■□□□ 1.44
TIMP4-201ENST00000287814 PUS7LQ9H0K6 701 aaKnown RBP24.02■■□□□ 1.44
TIMP4-201ENST00000287814 OSBPL5Q9H0X9 879 aaPredicted RBP24.02■■□□□ 1.44
TIMP4-201ENST00000287814 RNF113AO15541 343 aaKnown RBP24.01■■□□□ 1.43
TIMP4-201ENST00000287814 ZSCAN29Q8IWY8 852 aaPredicted RBP24.01■■□□□ 1.43
TIMP4-201ENST00000287814 FLT1P17948 1338 aa24■■□□□ 1.43
TIMP4-201ENST00000287814 RGMBQ6NW40 437 aa24■■□□□ 1.43
TIMP4-201ENST00000287814 PAXIP1Q6ZW49 1069 aaPredicted RBP24■■□□□ 1.43
TIMP4-201ENST00000287814 CENPQQ7L2Z9 268 aaPredicted RBP24■■□□□ 1.43
TIMP4-201ENST00000287814 FSD1Q9BTV5 496 aa24■■□□□ 1.43
TIMP4-201ENST00000287814 ARMT1Q9H993 441 aa24■■□□□ 1.43
TIMP4-201ENST00000287814 MBD4O95243 580 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 GRM1Q13255 1194 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 OSBP2Q969R2 916 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 EVI5LQ96CN4 794 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 CCDC136Q96JN2 1154 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 CAPNS2Q96L46 248 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 CSRNP1Q96S65 589 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 ATRNL1Q5VV63 1379 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 SKAP1Q86WV1 359 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 CERS3Q8IU89 383 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 CLMNQ96JQ2 1002 aa23.99■■□□□ 1.43
TIMP4-201ENST00000287814 WDR33Q9C0J8 1336 aaKnown RBP23.98■■□□□ 1.43
TIMP4-201ENST00000287814 ZNF157P51786 506 aaPredicted RBP23.98■■□□□ 1.43
TIMP4-201ENST00000287814 MYH7P12883 1935 aa23.97■■□□□ 1.43
TIMP4-201ENST00000287814 FAM155AB1AL88 458 aaPredicted RBP23.97■■□□□ 1.43
TIMP4-201ENST00000287814 PRKAB2O43741 272 aa23.97■■□□□ 1.43
TIMP4-201ENST00000287814 ZFYP08048 801 aaPredicted RBP23.97■■□□□ 1.43
TIMP4-201ENST00000287814 IREB2P48200 963 aaKnown RBP23.97■■□□□ 1.43
TIMP4-201ENST00000287814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.97■■□□□ 1.43
TIMP4-201ENST00000287814 APPBP2Q92624 585 aa23.97■■□□□ 1.43
TIMP4-201ENST00000287814 SAP30BPQ9UHR5 308 aaKnown RBP23.97■■□□□ 1.43
TIMP4-201ENST00000287814 PALD1Q9ULE6 856 aa23.97■■□□□ 1.43
TIMP4-201ENST00000287814 CDK5RAP2Q96SN8 1893 aa23.97■■□□□ 1.43
TIMP4-201ENST00000287814 USP5P45974 858 aa23.96■■□□□ 1.43
TIMP4-201ENST00000287814 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.96■■□□□ 1.43
TIMP4-201ENST00000287814 SDR42E1Q8WUS8 393 aa23.96■■□□□ 1.43
TIMP4-201ENST00000287814 HOOK2Q96ED9 719 aa23.96■■□□□ 1.43
TIMP4-201ENST00000287814 SEC62Q99442 399 aaKnown RBP23.96■■□□□ 1.43
TIMP4-201ENST00000287814 TRIM6-TRIM34B2RNG4 842 aa23.95■■□□□ 1.43
TIMP4-201ENST00000287814 AOC2O75106 756 aa23.95■■□□□ 1.43
TIMP4-201ENST00000287814 MAP3K10Q02779 954 aa23.95■■□□□ 1.43
TIMP4-201ENST00000287814 RILPL2Q969X0 211 aa23.95■■□□□ 1.43
TIMP4-201ENST00000287814 ZIC5Q96T25 663 aa23.95■■□□□ 1.43
TIMP4-201ENST00000287814 CRNKL1Q9BZJ0 848 aaKnown RBP23.95■■□□□ 1.43
TIMP4-201ENST00000287814 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.95■■□□□ 1.43
TIMP4-201ENST00000287814 COL2A1P02458 1487 aaPredicted RBP23.95■■□□□ 1.42
TIMP4-201ENST00000287814 AK9Q5TCS8 1911 aa23.95■■□□□ 1.42
TIMP4-201ENST00000287814 DCAF15Q66K64 600 aa23.95■■□□□ 1.42
TIMP4-201ENST00000287814 RASAL3Q86YV0 1011 aa23.95■■□□□ 1.42
TIMP4-201ENST00000287814 AIDAQ96BJ3 306 aa23.95■■□□□ 1.42
TIMP4-201ENST00000287814 FAM196BA6NMK8 535 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 M0R2C6 588 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 ECE1P42892 770 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 MAP3K9P80192 1104 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 SLC4A8Q2Y0W8 1093 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 ANKRD13AQ8IZ07 590 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 WRNIP1Q96S55 665 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 STRBPQ96SI9 672 aaKnown RBP23.94■■□□□ 1.42
TIMP4-201ENST00000287814 ZNF341Q9BYN7 854 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 ZNF112Q9UJU3 913 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 FOCADQ5VW36 1801 aa23.94■■□□□ 1.42
TIMP4-201ENST00000287814 SLC10A3P09131 477 aa23.93■■□□□ 1.42
TIMP4-201ENST00000287814 GSPT1P15170 499 aaKnown RBP23.93■■□□□ 1.42
TIMP4-201ENST00000287814 INPP5BP32019 993 aa23.93■■□□□ 1.42
TIMP4-201ENST00000287814 ZMYM1Q5SVZ6 1142 aa23.93■■□□□ 1.42
TIMP4-201ENST00000287814 ZKSCAN4Q969J2 545 aaPredicted RBP23.93■■□□□ 1.42
TIMP4-201ENST00000287814 CCDC102AQ96A19 550 aa23.93■■□□□ 1.42
TIMP4-201ENST00000287814 DHX36Q9H2U1 1008 aaKnown RBP23.93■■□□□ 1.42
TIMP4-201ENST00000287814 PHF20L1A8MW92 1017 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 VGLL4Q14135 290 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 LRRFIP1Q32MZ4 808 aaKnown RBP23.92■■□□□ 1.42
TIMP4-201ENST00000287814 TTC22Q5TAA0 569 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 ERICH6BQ5W0A0 696 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 JMYQ8N9B5 988 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 DCP1AQ9NPI6 582 aaPredicted RBP23.92■■□□□ 1.42
TIMP4-201ENST00000287814 EVX2Q03828 476 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 SLC10A4Q96EP9 437 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 PI4KBQ9UBF8 816 aa23.92■■□□□ 1.42
TIMP4-201ENST00000287814 UNCXA6NJT0 531 aa23.91■■□□□ 1.42
TIMP4-201ENST00000287814 GPAA1O43292 621 aa23.91■■□□□ 1.42
TIMP4-201ENST00000287814 TBC1D12O60347 775 aa23.91■■□□□ 1.42
TIMP4-201ENST00000287814 PPP4R2Q9NY27 417 aa23.91■■□□□ 1.42
TIMP4-201ENST00000287814 SLC4A4Q9Y6R1 1079 aa23.91■■□□□ 1.42
TIMP4-201ENST00000287814 MKRN3Q13064 507 aaKnown RBP23.9■■□□□ 1.42
TIMP4-201ENST00000287814 CNKSR2Q8WXI2 1034 aa23.9■■□□□ 1.42
TIMP4-201ENST00000287814 FAM227BQ96M60 508 aa23.9■■□□□ 1.42
TIMP4-201ENST00000287814 DNAJC18Q9H819 358 aa23.9■■□□□ 1.42
TIMP4-201ENST00000287814 ELP3Q9H9T3 547 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms