RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
GGPS1-201ENST00000282841 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-201ENST00000282841 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
GGPS1-201ENST00000282841 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
GGPS1-201ENST00000282841 USP5P45974 858 aa12.92□□□□□ -0.34
GGPS1-201ENST00000282841 TMEM67Q5HYA8 995 aa12.92□□□□□ -0.34
GGPS1-201ENST00000282841 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
GGPS1-201ENST00000282841 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-201ENST00000282841 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
GGPS1-201ENST00000282841 MTMR6Q9Y217 621 aa12.92□□□□□ -0.34
GGPS1-201ENST00000282841 PTPDC1A2A3K4 754 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-201ENST00000282841 IL1R1P14778 569 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 BTDP43251 543 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 PFKFB2O60825 505 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 DPEP1P16444 411 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 GNAT2P19087 354 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 ALX1Q15699 326 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 NSUN7Q8NE18 718 aaKnown RBP12.91□□□□□ -0.34
GGPS1-201ENST00000282841 AIFM3Q96NN9 605 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-201ENST00000282841 MTMR7Q9Y216 660 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 TCHHQ07283 1943 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 GADD45BO75293 160 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-201ENST00000282841 DNM1Q05193 864 aaKnown RBP12.91□□□□□ -0.34
GGPS1-201ENST00000282841 PICALMQ13492 652 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-201ENST00000282841 KIAA0825Q8IV33 1275 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 PHKBQ93100 1093 aa12.91□□□□□ -0.34
GGPS1-201ENST00000282841 CRNKL1Q9BZJ0 848 aaKnown RBP12.91□□□□□ -0.34
GGPS1-201ENST00000282841 FIBPO43427 364 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 CACNB3P54284 484 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 HSP90AA2PQ14568 343 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 IGDCC4Q8TDY8 1250 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 WDR33Q9C0J8 1336 aaKnown RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 CDC27P30260 824 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 PLCD1P51178 756 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 FAM184AQ8NB25 1140 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 AGXT2Q9BYV1 514 aa12.9□□□□□ -0.34
GGPS1-201ENST00000282841 ANGEL1Q9UNK9 670 aaKnown RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
GGPS1-201ENST00000282841 F13A1P00488 732 aa12.89□□□□□ -0.35
GGPS1-201ENST00000282841 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
GGPS1-201ENST00000282841 RTFDC1Q9BY42 306 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-201ENST00000282841 LY9Q9HBG7 655 aa12.89□□□□□ -0.35
GGPS1-201ENST00000282841 DUOX1Q9NRD9 1551 aa12.89□□□□□ -0.35
GGPS1-201ENST00000282841 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
GGPS1-201ENST00000282841 BAZ2BQ9UIF8 2168 aaKnown RBP12.89□□□□□ -0.35
GGPS1-201ENST00000282841 hCG_1642624A0A1W2PR95 340 aa12.89□□□□□ -0.35
GGPS1-201ENST00000282841 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
GGPS1-201ENST00000282841 GSE1Q14687 1217 aa12.89□□□□□ -0.35
GGPS1-201ENST00000282841 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-201ENST00000282841 FDPSP14324 419 aaKnown RBP12.88□□□□□ -0.35
GGPS1-201ENST00000282841 C15orf52Q6ZUT6 534 aaKnown RBP12.88□□□□□ -0.35
GGPS1-201ENST00000282841 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
GGPS1-201ENST00000282841 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
GGPS1-201ENST00000282841 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
GGPS1-201ENST00000282841 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
GGPS1-201ENST00000282841 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
GGPS1-201ENST00000282841 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-201ENST00000282841 MROH7-TTC4A0A0A0MT08 1334 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 H3BQV1 296 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 CPLX1O14810 134 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 APOA5Q6Q788 366 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 TEX11Q8IYF3 940 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 PIBF1Q8WXW3 757 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 FTOQ9C0B1 505 aaKnown RBP eCLIP12.87□□□□□ -0.35
GGPS1-201ENST00000282841 COA1Q9GZY4 146 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 ECE2O60344 883 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 KCNA3P22001 575 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 METAP2P50579 478 aaKnown RBP eCLIP12.87□□□□□ -0.35
GGPS1-201ENST00000282841 RBM5P52756 815 aaKnown RBP eCLIP12.87□□□□□ -0.35
GGPS1-201ENST00000282841 C7orf43Q8WVR3 580 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 ZNF274Q96GC6 653 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-201ENST00000282841 DAGLAQ9Y4D2 1042 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
GGPS1-201ENST00000282841 STYK1Q6J9G0 422 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
GGPS1-201ENST00000282841 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
GGPS1-201ENST00000282841 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
GGPS1-201ENST00000282841 TNKSO95271 1327 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 SALL1Q9NSC2 1324 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 WTAPQ15007 396 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 CNKSR1Q969H4 720 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 KRT23Q9C075 422 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 SLC12A7Q9Y666 1083 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 ZBTB43O43298 467 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 PPIP5K2O43314 1243 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 RAD17O75943 681 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms