RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
LRTM1-201ENST00000273286 EML1O00423 815 aa13.01□□□□□ -0.33
LRTM1-201ENST00000273286 DPEP1P16444 411 aa13.01□□□□□ -0.33
LRTM1-201ENST00000273286 SIX5Q8N196 739 aa13.01□□□□□ -0.33
LRTM1-201ENST00000273286 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
LRTM1-201ENST00000273286 MKL2Q9ULH7 1088 aa13.01□□□□□ -0.33
LRTM1-201ENST00000273286 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
LRTM1-201ENST00000273286 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
LRTM1-201ENST00000273286 TJP1Q07157 1748 aa13.01□□□□□ -0.33
LRTM1-201ENST00000273286 BRCA1P38398 1863 aaKnown RBP13.01□□□□□ -0.33
LRTM1-201ENST00000273286 ARFGEF1Q9Y6D6 1849 aa13□□□□□ -0.33
LRTM1-201ENST00000273286 NPC1L1Q9UHC9 1359 aa13□□□□□ -0.33
LRTM1-201ENST00000273286 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
LRTM1-201ENST00000273286 EPXP11678 715 aa13□□□□□ -0.33
LRTM1-201ENST00000273286 PSMA6P60900 246 aaKnown RBP13□□□□□ -0.33
LRTM1-201ENST00000273286 LRRC69Q6ZNQ3 347 aa13□□□□□ -0.33
LRTM1-201ENST00000273286 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
LRTM1-201ENST00000273286 MAFBQ9Y5Q3 323 aaPredicted RBP13□□□□□ -0.33
LRTM1-201ENST00000273286 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
LRTM1-201ENST00000273286 TOMM70O94826 608 aa12.99□□□□□ -0.33
LRTM1-201ENST00000273286 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
LRTM1-201ENST00000273286 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
LRTM1-201ENST00000273286 TSEN2Q8NCE0 465 aaKnown RBP12.99□□□□□ -0.33
LRTM1-201ENST00000273286 SFI1A8K8P3 1242 aa12.98□□□□□ -0.33
LRTM1-201ENST00000273286 M0R2N6 131 aa12.98□□□□□ -0.33
LRTM1-201ENST00000273286 ADH6P28332 368 aa12.98□□□□□ -0.33
LRTM1-201ENST00000273286 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
LRTM1-201ENST00000273286 ADAMTS7Q9UKP4 1686 aa12.98□□□□□ -0.33
LRTM1-201ENST00000273286 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
LRTM1-201ENST00000273286 POLRMTO00411 1230 aaKnown RBP12.97□□□□□ -0.33
LRTM1-201ENST00000273286 EFSO43281 561 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 HMOX1P09601 288 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
LRTM1-201ENST00000273286 RASA1P20936 1047 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 KCNA3P22001 575 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 TM4SF1P30408 202 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 RHPN1Q8TCX5 695 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 CALR3Q96L12 384 aaKnown RBP12.97□□□□□ -0.33
LRTM1-201ENST00000273286 NEUROD4Q9HD90 331 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 MARK1Q9P0L2 795 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
LRTM1-201ENST00000273286 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 COL15A1P39059 1388 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
LRTM1-201ENST00000273286 A6NJR5 290 aa12.96□□□□□ -0.33
LRTM1-201ENST00000273286 IGHA1P01876 353 aa12.96□□□□□ -0.33
LRTM1-201ENST00000273286 DDR1Q08345 913 aa12.96□□□□□ -0.33
LRTM1-201ENST00000273286 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
LRTM1-201ENST00000273286 GAS2L2Q8NHY3 880 aa12.96□□□□□ -0.33
LRTM1-201ENST00000273286 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
LRTM1-201ENST00000273286 PRR12Q9ULL5 1215 aa12.96□□□□□ -0.33
LRTM1-201ENST00000273286 GPC6Q9Y625 555 aaPredicted RBP12.96□□□□□ -0.33
LRTM1-201ENST00000273286 KCPQ6ZWJ8 1503 aa12.96□□□□□ -0.34
LRTM1-201ENST00000273286 DKK1O94907 266 aa12.96□□□□□ -0.34
LRTM1-201ENST00000273286 STARD3NLO95772 234 aa12.96□□□□□ -0.34
LRTM1-201ENST00000273286 LAMC2Q13753 1193 aa12.96□□□□□ -0.34
LRTM1-201ENST00000273286 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.34
LRTM1-201ENST00000273286 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.34
LRTM1-201ENST00000273286 AVENQ9NQS1 362 aaPredicted RBP12.96□□□□□ -0.34
LRTM1-201ENST00000273286 KLF15Q9UIH9 416 aa12.96□□□□□ -0.34
LRTM1-201ENST00000273286 A0A087WZG4 1122 aa12.95□□□□□ -0.34
LRTM1-201ENST00000273286 TEFQ10587 303 aa12.95□□□□□ -0.34
LRTM1-201ENST00000273286 PLA2G4EQ3MJ16 856 aa12.95□□□□□ -0.34
LRTM1-201ENST00000273286 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
LRTM1-201ENST00000273286 C9orf131Q5VYM1 1079 aa12.95□□□□□ -0.34
LRTM1-201ENST00000273286 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
LRTM1-201ENST00000273286 BTBD6Q96KE9 485 aa12.95□□□□□ -0.34
LRTM1-201ENST00000273286 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
LRTM1-201ENST00000273286 HOXB4P17483 251 aaPredicted RBP12.94□□□□□ -0.34
LRTM1-201ENST00000273286 PCBP4P57723 403 aaKnown RBP12.94□□□□□ -0.34
LRTM1-201ENST00000273286 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
LRTM1-201ENST00000273286 ZNF468Q5VIY5 522 aaPredicted RBP12.94□□□□□ -0.34
LRTM1-201ENST00000273286 C16orf71Q8IYS4 520 aaPredicted RBP12.94□□□□□ -0.34
LRTM1-201ENST00000273286 ZBTB1Q9Y2K1 713 aa12.94□□□□□ -0.34
LRTM1-201ENST00000273286 HCN4Q9Y3Q4 1203 aa12.94□□□□□ -0.34
LRTM1-201ENST00000273286 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
LRTM1-201ENST00000273286 GNAT3A8MTJ3 354 aa12.93□□□□□ -0.34
LRTM1-201ENST00000273286 PPP1R12BO60237 982 aaPredicted RBP12.93□□□□□ -0.34
LRTM1-201ENST00000273286 HIRAP54198 1017 aaPredicted RBP12.93□□□□□ -0.34
LRTM1-201ENST00000273286 NFIXQ14938 502 aa12.93□□□□□ -0.34
LRTM1-201ENST00000273286 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
LRTM1-201ENST00000273286 C7orf43Q8WVR3 580 aa12.93□□□□□ -0.34
LRTM1-201ENST00000273286 PPP1R12CQ9BZL4 782 aa12.93□□□□□ -0.34
LRTM1-201ENST00000273286 PHACTR1Q9C0D0 580 aa12.93□□□□□ -0.34
LRTM1-201ENST00000273286 NRXN2Q9P2S2 1712 aa12.93□□□□□ -0.34
LRTM1-201ENST00000273286 FSTL1Q12841 308 aa12.92□□□□□ -0.34
LRTM1-201ENST00000273286 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
LRTM1-201ENST00000273286 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
LRTM1-201ENST00000273286 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
LRTM1-201ENST00000273286 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
LRTM1-201ENST00000273286 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
LRTM1-201ENST00000273286 SERPINB2P05120 415 aa12.91□□□□□ -0.34
LRTM1-201ENST00000273286 CHRNA5P30532 468 aa12.91□□□□□ -0.34
LRTM1-201ENST00000273286 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
LRTM1-201ENST00000273286 SEC13P55735 322 aa12.91□□□□□ -0.34
LRTM1-201ENST00000273286 C1orf53Q5VUE5 145 aa12.91□□□□□ -0.34
LRTM1-201ENST00000273286 LINC00114Q6XXX2 140 aa12.91□□□□□ -0.34
LRTM1-201ENST00000273286 CHSY3Q70JA7 882 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms