RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 NR1H4Q96RI1 486 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 MAP3K14Q99558 947 aa10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 FAM184BQ9ULE4 1060 aa10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 EIF3CLB5ME19 914 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 MUSKO15146 869 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 DIAPH2O60879 1101 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 SERPINC1P01008 464 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 DNAJA1P31689 397 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 EVA1CP58658 441 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 NUTM2DQ5VT03 806 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 ITPRIPQ8IWB1 547 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 ANKRD49Q8WVL7 239 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 EIF3CQ99613 913 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 YIPF3Q9GZM5 350 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 ITGB1BP2Q9UKP3 347 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 PLA2R1Q13018 1463 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 ARHGEF2Q92974 986 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 TSC22D3Q99576 134 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 API5Q9BZZ5 524 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 LNPKQ9C0E8 428 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 LZTS1Q9Y250 596 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 SHANK2Q9UPX8 1470 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 STAM2O75886 525 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 SEPT6Q14141 434 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 CAVIN1Q6NZI2 390 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 MAATS1Q7Z4T9 603 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 MCM3P25205 808 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 MAN1A1P33908 653 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 CYB5RLQ6IPT4 315 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 NEK5Q6P3R8 708 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 GGT6Q6P531 493 aa10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 NOP9Q86U38 636 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-201ENST00000273179 CCNHP51946 323 aaPredicted RBP10□□□□□ -0.81
CTDSPL-201ENST00000273179 PACS2Q86VP3 889 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 OSBPL9Q96SU4 736 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 BICC1Q9H694 974 aaKnown RBP10□□□□□ -0.81
CTDSPL-201ENST00000273179 ANGPTL3Q9Y5C1 460 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 BCORL1Q5H9F3 1711 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 KRT18P05783 430 aaKnown RBP10□□□□□ -0.81
CTDSPL-201ENST00000273179 CLK1P49759 484 aaKnown RBP10□□□□□ -0.81
CTDSPL-201ENST00000273179 GNL2Q13823 731 aaKnown RBP10□□□□□ -0.81
CTDSPL-201ENST00000273179 TAF11Q15544 211 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 THOC7Q6I9Y2 204 aaKnown RBP10□□□□□ -0.81
CTDSPL-201ENST00000273179 LUZP1Q86V48 1076 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 CCDC102AQ96A19 550 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 TRIM64A6NGJ6 449 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 TRIM64BA6NI03 449 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 TSPAN9O75954 239 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 RAPGEF3O95398 923 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 CCNCP24863 283 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 HSPA1LP34931 641 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 COX10Q12887 443 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 IFFO2Q5TF58 517 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 FBXO18Q8NFZ0 1043 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 GCC1Q96CN9 775 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 POM121Q96HA1 1249 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 DHTKD1Q96HY7 919 aaPredicted RBP10□□□□□ -0.81
CTDSPL-201ENST00000273179 PFDN4Q9NQP4 134 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 KMT5AQ9NQR1 393 aa10□□□□□ -0.81
CTDSPL-201ENST00000273179 TUBA3CQ13748 450 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 PLCB4Q15147 1175 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 ANKRD45Q5TZF3 282 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 FAM117BQ6P1L5 589 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 POTEDQ86YR6 584 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 NDUFB5O43674 189 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 KRT14P02533 472 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 RUFY3Q7L099 469 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 IPCEF1Q8WWN9 437 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 ALOX15P16050 662 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 CCDC93Q567U6 631 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 TADA2BQ86TJ2 420 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 AGAP3Q96P47 875 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 MMTAG2Q9BU76 263 aaKnown RBP9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 SIL1Q9H173 461 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 NRDE2Q9H7Z3 1164 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 CEP131Q9UPN4 1083 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 AP2B1P63010 937 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 CHPFQ8IZ52 775 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 CCDC63Q8NA47 563 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 ZNF483Q8TF39 744 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 TSG101Q99816 390 aa9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 SRRTQ9BXP5 876 aaKnown RBP9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTDSPL-201ENST00000273179 OPA1O60313 960 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 SDE2Q6IQ49 451 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 ANKRD13DQ6ZTN6 518 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 STAG1Q8WVM7 1258 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 APPBP2Q92624 585 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 SPACA7Q96KW9 195 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 RNF8O76064 485 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.814e-8■□□□□ 10.5
CTDSPL-201ENST00000273179 GEMIN4P57678 1058 aaKnown RBP9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 ANKRD1Q15327 319 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 TCERG1LQ5VWI1 586 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 JARID2Q92833 1246 aaPredicted RBP9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 TATDN2Q93075 761 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 IL17RAQ96F46 866 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms