RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RUFY2Q8WXA3 655 aa29.52■■■□□ 2.32
SSBP4-201ENST00000270061 IREB2P48200 963 aaKnown RBP29.52■■■□□ 2.32
SSBP4-201ENST00000270061 TICAM2Q86XR7 235 aa29.52■■■□□ 2.32
SSBP4-201ENST00000270061 CDAN1Q8IWY9 1227 aa29.52■■■□□ 2.32
SSBP4-201ENST00000270061 SLF2Q8IX21 1173 aa29.52■■■□□ 2.32
SSBP4-201ENST00000270061 CDC42EP5Q6NZY7 148 aa29.51■■■□□ 2.31
SSBP4-201ENST00000270061 DIAPH3Q9NSV4 1193 aa29.51■■■□□ 2.31
SSBP4-201ENST00000270061 OTOFQ9HC10 1997 aa29.51■■■□□ 2.31
SSBP4-201ENST00000270061 REM2Q8IYK8 340 aaPredicted RBP29.5■■■□□ 2.31
SSBP4-201ENST00000270061 SNX21Q969T3 373 aa29.5■■■□□ 2.31
SSBP4-201ENST00000270061 RFX7Q2KHR2 1363 aa29.5■■■□□ 2.31
SSBP4-201ENST00000270061 UNCXA6NJT0 531 aa29.49■■■□□ 2.31
SSBP4-201ENST00000270061 USP2O75604 605 aaPredicted RBP29.49■■■□□ 2.31
SSBP4-201ENST00000270061 CSRNP1Q96S65 589 aa29.49■■■□□ 2.31
SSBP4-201ENST00000270061 TSKSQ9UJT2 592 aa29.49■■■□□ 2.31
SSBP4-201ENST00000270061 GAKO14976 1311 aa29.49■■■□□ 2.31
SSBP4-201ENST00000270061 SLC10A4Q96EP9 437 aa29.49■■■□□ 2.31
SSBP4-201ENST00000270061 TBC1D2Q9BYX2 928 aa29.49■■■□□ 2.31
SSBP4-201ENST00000270061 USP40Q9NVE5 1235 aa29.48■■■□□ 2.31
SSBP4-201ENST00000270061 MYO5AQ9Y4I1 1855 aaKnown RBP29.48■■■□□ 2.31
SSBP4-201ENST00000270061 SLC4A3P48751 1232 aa29.47■■■□□ 2.31
SSBP4-201ENST00000270061 MECOMQ03112 1051 aa29.47■■■□□ 2.31
SSBP4-201ENST00000270061 FAM163AQ96GL9 167 aaPredicted RBP29.47■■■□□ 2.31
SSBP4-201ENST00000270061 IL25Q9H293 177 aa29.47■■■□□ 2.31
SSBP4-201ENST00000270061 ANO2Q9NQ90 1003 aa29.47■■■□□ 2.31
SSBP4-201ENST00000270061 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.47■■■□□ 2.31
SSBP4-201ENST00000270061 MKRN3Q13064 507 aaKnown RBP29.47■■■□□ 2.31
SSBP4-201ENST00000270061 CWC27Q6UX04 472 aaKnown RBP29.47■■■□□ 2.31
SSBP4-201ENST00000270061 ANKRD13AQ8IZ07 590 aa29.47■■■□□ 2.31
SSBP4-201ENST00000270061 CLMNQ96JQ2 1002 aa29.47■■■□□ 2.31
SSBP4-201ENST00000270061 ZNF512BQ96KM6 892 aaPredicted RBP29.47■■■□□ 2.31
SSBP4-201ENST00000270061 CASP8AP2Q9UKL3 1982 aa29.46■■■□□ 2.31
SSBP4-201ENST00000270061 RPAP1Q9BWH6 1393 aaPredicted RBP29.46■■■□□ 2.31
SSBP4-201ENST00000270061 FSD1Q9BTV5 496 aa29.46■■■□□ 2.31
SSBP4-201ENST00000270061 SNRKQ9NRH2 765 aa29.46■■■□□ 2.31
SSBP4-201ENST00000270061 RAD50Q92878 1312 aa29.45■■■□□ 2.31
SSBP4-201ENST00000270061 FAM151AQ8WW52 585 aa29.45■■■□□ 2.31
SSBP4-201ENST00000270061 HOOK2Q96ED9 719 aa29.45■■■□□ 2.31
SSBP4-201ENST00000270061 IL17RAQ96F46 866 aa29.45■■■□□ 2.31
SSBP4-201ENST00000270061 RAI14Q9P0K7 980 aa29.45■■■□□ 2.31
SSBP4-201ENST00000270061 LRP2BPQ9P2M1 347 aa29.45■■■□□ 2.31
SSBP4-201ENST00000270061 MROH7-TTC4A0A0A0MT08 1334 aa29.45■■■□□ 2.3
SSBP4-201ENST00000270061 MCCP23508 829 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 TCP10Q12799 353 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 NFIAQ12857 509 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 RABEP1Q15276 862 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 SPRYD7Q5W111 196 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 TNS4Q8IZW8 715 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 GSTO1P78417 241 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 NSUN4Q96CB9 384 aaKnown RBP29.44■■■□□ 2.3
SSBP4-201ENST00000270061 SAGE1Q9NXZ1 904 aa29.44■■■□□ 2.3
SSBP4-201ENST00000270061 BTDP43251 543 aa29.43■■■□□ 2.3
SSBP4-201ENST00000270061 ANAPC15P60006 121 aa29.43■■■□□ 2.3
SSBP4-201ENST00000270061 ZNF384Q8TF68 577 aa29.43■■■□□ 2.3
SSBP4-201ENST00000270061 LDHCP07864 332 aa29.42■■■□□ 2.3
SSBP4-201ENST00000270061 LSG1Q9H089 658 aaKnown RBP29.42■■■□□ 2.3
SSBP4-201ENST00000270061 RNF186Q9NXI6 227 aa29.42■■■□□ 2.3
SSBP4-201ENST00000270061 LAMB1P07942 1786 aa29.42■■■□□ 2.3
SSBP4-201ENST00000270061 MAST2Q6P0Q8 1798 aa29.42■■■□□ 2.3
SSBP4-201ENST00000270061 TRPA1O75762 1119 aa29.41■■■□□ 2.3
SSBP4-201ENST00000270061 KBTBD3Q8NAB2 608 aa29.41■■■□□ 2.3
SSBP4-201ENST00000270061 DNAJC2Q99543 621 aaKnown RBP29.41■■■□□ 2.3
SSBP4-201ENST00000270061 FAM198AQ9UFP1 575 aa29.41■■■□□ 2.3
SSBP4-201ENST00000270061 ZBTB48P10074 688 aaPredicted RBP29.41■■■□□ 2.3
SSBP4-201ENST00000270061 SREBF2Q12772 1141 aa29.41■■■□□ 2.3
SSBP4-201ENST00000270061 KIAA1211Q6ZU35 1233 aa29.41■■■□□ 2.3
SSBP4-201ENST00000270061 EDC3Q96F86 508 aaKnown RBP29.41■■■□□ 2.3
SSBP4-201ENST00000270061 WNK4Q96J92 1243 aa29.41■■■□□ 2.3
SSBP4-201ENST00000270061 PAG1Q9NWQ8 432 aa29.41■■■□□ 2.3
SSBP4-201ENST00000270061 GPR75-ASB3A0A0A6YYF3 556 aa29.4■■■□□ 2.3
SSBP4-201ENST00000270061 CYP2E1P05181 493 aaPredicted RBP29.4■■■□□ 2.3
SSBP4-201ENST00000270061 NMIQ13287 307 aaPredicted RBP29.4■■■□□ 2.3
SSBP4-201ENST00000270061 DCAF15Q66K64 600 aa29.4■■■□□ 2.3
SSBP4-201ENST00000270061 HSCBQ8IWL3 235 aa29.4■■■□□ 2.3
SSBP4-201ENST00000270061 IDI2Q9BXS1 227 aa29.4■■■□□ 2.3
SSBP4-201ENST00000270061 ZAP70P43403 619 aa29.39■■■□□ 2.3
SSBP4-201ENST00000270061 TM4SF4P48230 202 aa29.39■■■□□ 2.3
SSBP4-201ENST00000270061 MAP3K9P80192 1104 aa29.39■■■□□ 2.3
SSBP4-201ENST00000270061 IFFO2Q5TF58 517 aa29.39■■■□□ 2.3
SSBP4-201ENST00000270061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.39■■■□□ 2.35e-8■■■■■ 57.5
SSBP4-201ENST00000270061 DOCK2Q92608 1830 aa29.39■■■□□ 2.3
SSBP4-201ENST00000270061 HSPA4P34932 840 aa29.39■■■□□ 2.29
SSBP4-201ENST00000270061 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.39■■■□□ 2.29
SSBP4-201ENST00000270061 CSADQ9Y600 493 aa29.39■■■□□ 2.29
SSBP4-201ENST00000270061 FAM227BQ96M60 508 aa29.38■■■□□ 2.29
SSBP4-201ENST00000270061 ELP3Q9H9T3 547 aa29.38■■■□□ 2.29
SSBP4-201ENST00000270061 ENTPD3O75355 529 aa29.37■■■□□ 2.29
SSBP4-201ENST00000270061 VGLL4Q14135 290 aa29.37■■■□□ 2.29
SSBP4-201ENST00000270061 IL27Q8NEV9 243 aa29.37■■■□□ 2.29
SSBP4-201ENST00000270061 NDUFB9Q9Y6M9 179 aa29.37■■■□□ 2.29
SSBP4-201ENST00000270061 MANSC4A6NHS7 340 aaPredicted RBP29.36■■■□□ 2.29
SSBP4-201ENST00000270061 NAA16Q6N069 864 aaPredicted RBP29.36■■■□□ 2.29
SSBP4-201ENST00000270061 MIGA2Q7L4E1 593 aa29.36■■■□□ 2.29
SSBP4-201ENST00000270061 WRNIP1Q96S55 665 aa29.36■■■□□ 2.29
SSBP4-201ENST00000270061 GOLIM4O00461 696 aa29.36■■■□□ 2.29
SSBP4-201ENST00000270061 WDHD1O75717 1129 aaPredicted RBP29.36■■■□□ 2.29
SSBP4-201ENST00000270061 ZFPM1Q8IX07 1006 aa29.36■■■□□ 2.29
SSBP4-201ENST00000270061 RHBDL3P58872 404 aa29.35■■■□□ 2.29
SSBP4-201ENST00000270061 OPTNQ96CV9 577 aa29.35■■■□□ 2.29
SSBP4-201ENST00000270061 ZNF341Q9BYN7 854 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms