RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 POLR2DO15514 142 aaKnown RBP13.06□□□□□ -0.32
VPS33A-201ENST00000267199 TACC1O75410 805 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 STAT6P42226 847 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 TCERG1LQ5VWI1 586 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 NAPGQ99747 312 aaPredicted RBP13.06□□□□□ -0.32
VPS33A-201ENST00000267199 PYM1Q9BRP8 204 aaKnown RBP13.06□□□□□ -0.32
VPS33A-201ENST00000267199 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
VPS33A-201ENST00000267199 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
VPS33A-201ENST00000267199 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
VPS33A-201ENST00000267199 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 SCLT1Q96NL6 688 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 NDUFAB1O14561 156 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 PFKFB2O60825 505 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 LRRC24Q50LG9 513 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 MYSM1Q5VVJ2 828 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 CNGA4Q8IV77 575 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 TSG101Q99816 390 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 SETBP1Q9Y6X0 1596 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
VPS33A-201ENST00000267199 SASH1O94885 1247 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 GNAT2P19087 354 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 PNOCQ13519 176 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 MED14O60244 1454 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 TMEM266Q2M3C6 531 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 PSMB7Q99436 277 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 SCRN1Q12765 414 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 STAMQ92783 540 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 CCDC114Q96M63 670 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 SSR1P43307 286 aaKnown RBP13.05□□□□□ -0.32
VPS33A-201ENST00000267199 RILPL1Q5EBL4 403 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 GBP6Q6ZN66 633 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 CALML4Q96GE6 196 aa13.05□□□□□ -0.32
VPS33A-201ENST00000267199 PSMA7O14818 248 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 KRT83P78385 493 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 ZNF827Q17R98 1081 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 ADALQ6DHV7 355 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
VPS33A-201ENST00000267199 HINFPQ9BQA5 517 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 RMND1Q9NWS8 449 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 SETD1BQ9UPS6 1966 aaKnown RBP13.04□□□□□ -0.32
VPS33A-201ENST00000267199 GSTTP1A0A1W2PQM5 241 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 BAG3O95817 575 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 ZNF76P36508 570 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
VPS33A-201ENST00000267199 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
VPS33A-201ENST00000267199 CEP152O94986 1710 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 LDHCP07864 332 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
VPS33A-201ENST00000267199 KRT2P35908 639 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 CCDC121Q6ZUS5 278 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 VPS36Q86VN1 386 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 PPP1R13BQ96KQ4 1090 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
VPS33A-201ENST00000267199 HPDP32754 393 aaPredicted RBP13.03□□□□□ -0.32
VPS33A-201ENST00000267199 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
VPS33A-201ENST00000267199 AMPD3Q01432 767 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 SF3A3Q12874 501 aaKnown RBP eCLIP13.03□□□□□ -0.32
VPS33A-201ENST00000267199 TERF2Q15554 542 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
VPS33A-201ENST00000267199 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 VWA3AA6NCI4 1184 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 ZBTB22O15209 634 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 PRDM1O75626 825 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 VAV2P52735 878 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 HSPA2P54652 639 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 CFAP58Q5T655 872 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 NLRP1Q9C000 1473 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 FGAP02671 866 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 TUBBP07437 444 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 PFKFB1P16118 471 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 INPP5BP32019 993 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 MCM7P33993 719 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 KRT9P35527 623 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 ZNF174Q15697 407 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 HEATR3Q7Z4Q2 680 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 PCDHA7Q9UN72 937 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 PPP2R2CQ9Y2T4 447 aa13.03□□□□□ -0.32
VPS33A-201ENST00000267199 SMIM23A6NLE4 172 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 CLCN6P51797 869 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 NDUFA8P51970 172 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.32
VPS33A-201ENST00000267199 ASIC1P78348 528 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 UBE4AQ14139 1066 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms