RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
TTC39A-201ENST00000262675 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.54□□□□□ -0.56
TTC39A-201ENST00000262675 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 TEPSINQ96N21 525 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 FZD1Q9UP38 647 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 PCDHAC2Q9Y5I4 1007 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 SMARCA5O60264 1052 aaPredicted RBP11.54□□□□□ -0.56
TTC39A-201ENST00000262675 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
TTC39A-201ENST00000262675 TAF1CQ15572 869 aaPredicted RBP11.54□□□□□ -0.56
TTC39A-201ENST00000262675 KLHL40Q2TBA0 621 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 ERO1BQ86YB8 467 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 OTUD7AQ8TE49 926 aaPredicted RBP11.54□□□□□ -0.56
TTC39A-201ENST00000262675 SSH3Q8TE77 659 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 CCL15-CCL14A0A0B4J2E2 113 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 SPDYE5A6NIY4 337 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 CYP2E1P05181 493 aaPredicted RBP11.53□□□□□ -0.56
TTC39A-201ENST00000262675 CCL15Q16663 113 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 METTL24Q5JXM2 366 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.53□□□□□ -0.56
TTC39A-201ENST00000262675 SUCLG2Q96I99 432 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 ZDHHC15Q96MV8 337 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 PTPN18Q99952 460 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 GRPEL1Q9HAV7 217 aa11.53□□□□□ -0.56
TTC39A-201ENST00000262675 TCP10L2B9ZVM9 353 aa11.52□□□□□ -0.56
TTC39A-201ENST00000262675 PDE8BO95263 885 aa11.52□□□□□ -0.56
TTC39A-201ENST00000262675 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.56
TTC39A-201ENST00000262675 VGLL4Q14135 290 aa11.52□□□□□ -0.56
TTC39A-201ENST00000262675 HHIPL2Q6UWX4 724 aa11.52□□□□□ -0.56
TTC39A-201ENST00000262675 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.56
TTC39A-201ENST00000262675 JAG2Q9Y219 1238 aa11.52□□□□□ -0.56
TTC39A-201ENST00000262675 BAG4O95429 457 aaKnown RBP11.52□□□□□ -0.57
TTC39A-201ENST00000262675 SNAPC2Q13487 334 aa11.52□□□□□ -0.57
TTC39A-201ENST00000262675 BRI3BPQ8WY22 251 aa11.52□□□□□ -0.57
TTC39A-201ENST00000262675 ESYT1Q9BSJ8 1104 aa11.52□□□□□ -0.57
TTC39A-201ENST00000262675 USP44Q9H0E7 712 aa11.52□□□□□ -0.57
TTC39A-201ENST00000262675 GZF1Q9H116 711 aaPredicted RBP11.52□□□□□ -0.57
TTC39A-201ENST00000262675 PPIL2Q13356 520 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
TTC39A-201ENST00000262675 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 WDR66Q8TBY9 1149 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 ZNF333Q96JL9 665 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 TMEM39BQ9GZU3 492 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 MYH13Q9UKX3 1938 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 APBB1O00213 710 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 TLR2O60603 784 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 CAPN2P17655 700 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 POLA2Q14181 598 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 INTS4Q96HW7 963 aaKnown RBP11.51□□□□□ -0.57
TTC39A-201ENST00000262675 ZNF341Q9BYN7 854 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 PUS3Q9BZE2 481 aaKnown RBP11.51□□□□□ -0.57
TTC39A-201ENST00000262675 BICC1Q9H694 974 aaKnown RBP11.51□□□□□ -0.57
TTC39A-201ENST00000262675 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
TTC39A-201ENST00000262675 EXOC6BQ9Y2D4 811 aa11.51□□□□□ -0.57
TTC39A-201ENST00000262675 PPATQ06203 517 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 CHAF1AQ13111 956 aaPredicted RBP11.5□□□□□ -0.57
TTC39A-201ENST00000262675 VGLL2Q8N8G2 317 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 LRRFIP2Q9Y608 721 aaKnown RBP11.5□□□□□ -0.57
TTC39A-201ENST00000262675 PNMA6EA0A0J9YXQ4 647 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 ZBTB22O15209 634 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 NBPF7P0C2Y1 421 aaPredicted RBP11.5□□□□□ -0.57
TTC39A-201ENST00000262675 SLC5A1P13866 664 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 CHMLP26374 656 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 HOXD10P28358 340 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 KIF1BPQ96EK5 621 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 WRNIP1Q96S55 665 aa11.5□□□□□ -0.57
TTC39A-201ENST00000262675 HABP4Q5JVS0 413 aaKnown RBP11.49□□□□□ -0.57
TTC39A-201ENST00000262675 GNL3LQ9NVN8 582 aaKnown RBP11.49□□□□□ -0.57
TTC39A-201ENST00000262675 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
TTC39A-201ENST00000262675 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 ANKRD23Q86SG2 305 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 LPIN2Q92539 896 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 DDX49Q9Y6V7 483 aaKnown RBP11.48□□□□□ -0.57
TTC39A-201ENST00000262675 SEMA3EO15041 775 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 FGFR2P21802 821 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 LACTBP83111 547 aaPredicted RBP11.48□□□□□ -0.57
TTC39A-201ENST00000262675 MTX1Q13505 466 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 CUL4AQ13619 759 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 APOBEC3HQ6NTF7 200 aaKnown RBP11.48□□□□□ -0.57
TTC39A-201ENST00000262675 ANP32BQ92688 251 aaKnown RBP11.48□□□□□ -0.57
TTC39A-201ENST00000262675 PTCH2Q9Y6C5 1203 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 AK9Q5TCS8 1911 aa11.48□□□□□ -0.57
TTC39A-201ENST00000262675 TTC41PQ6P2S7 1318 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 EN2P19622 333 aaPredicted RBP11.47□□□□□ -0.57
TTC39A-201ENST00000262675 ZNF445P59923 1031 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
TTC39A-201ENST00000262675 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 BTBD19C9JJ37 291 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 EYA2O00167 538 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 BCAMP50895 628 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 NOL9Q5SY16 702 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms