RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FGFR1OPO95684 399 aaKnown RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 B4GALNT4Q76KP1 1039 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 SRGAP1Q7Z6B7 1085 aa18.31■□□□□ 0.52
SREBF1-201ENST00000261646 TRMT112Q9UI30 125 aaKnown RBP18.31■□□□□ 0.52
SREBF1-201ENST00000261646 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
SREBF1-201ENST00000261646 VWA3AA6NCI4 1184 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 MAP2K2P36507 400 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 CCDC40Q4G0X9 1142 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 TAB2Q9NYJ8 693 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 SYNRGQ9UMZ2 1314 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 POLR1AO95602 1720 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-201ENST00000261646 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 MLH3Q9UHC1 1453 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 ANKRD18BA2A2Z9 1011 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 HPDP32754 393 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-201ENST00000261646 IQUBQ8NA54 791 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 TSG101Q99816 390 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 FAM204AQ9H8W3 233 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 SERTAD1Q9UHV2 236 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 CDC23Q9UJX2 597 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 E2F4Q16254 413 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 BCAS4Q8TDM0 211 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-201ENST00000261646 ZNF496Q96IT1 587 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-201ENST00000261646 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 RTEL1Q9NZ71 1219 aa18.3■□□□□ 0.52
SREBF1-201ENST00000261646 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
SREBF1-201ENST00000261646 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
SREBF1-201ENST00000261646 HELBQ8NG08 1087 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-201ENST00000261646 KRT23Q9C075 422 aa18.29■□□□□ 0.52
SREBF1-201ENST00000261646 HOXB7P09629 217 aa18.29■□□□□ 0.52
SREBF1-201ENST00000261646 JRKLQ9Y4A0 524 aa18.29■□□□□ 0.52
SREBF1-201ENST00000261646 PDIA3P30101 505 aaKnown RBP18.29■□□□□ 0.52
SREBF1-201ENST00000261646 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
SREBF1-201ENST00000261646 CPLX4Q7Z7G2 160 aa18.29■□□□□ 0.52
SREBF1-201ENST00000261646 ABCC3O15438 1527 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 SLFN14P0C7P3 912 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 ATP2B2Q01814 1243 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 ARFGAP2Q8N6H7 521 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 RGS22Q8NE09 1264 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 EXOC1Q9NV70 894 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 USP5P45974 858 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 ZNF174Q15697 407 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 TMTC2Q8N394 836 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 CCDC43Q96MW1 224 aaKnown RBP18.28■□□□□ 0.52
SREBF1-201ENST00000261646 MYCBPQ99417 103 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-201ENST00000261646 PLIN2Q99541 437 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 ARID5AQ03989 594 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 SLC4A8Q2Y0W8 1093 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 FAM71BQ8TC56 605 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 WWC3Q9ULE0 1092 aa18.28■□□□□ 0.52
SREBF1-201ENST00000261646 CCT5P48643 541 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 KCNJ14Q9UNX9 436 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 TBC1D8BQ0IIM8 1120 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 GPIHBP1Q8IV16 184 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 AATKQ6ZMQ8 1374 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 GOLGA6L10A0A0M3HER8 536 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 VPS36Q86VN1 386 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 FCHSD1Q86WN1 690 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 LINC00301Q8NCQ3 95 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 CNNM2Q9H8M5 875 aa18.27■□□□□ 0.52
SREBF1-201ENST00000261646 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.51
SREBF1-201ENST00000261646 IGHMBP2P38935 993 aaKnown RBP18.27■□□□□ 0.51
SREBF1-201ENST00000261646 WHAMMP3Q1A5X7 153 aa18.27■□□□□ 0.51
SREBF1-201ENST00000261646 MSL1Q68DK7 614 aa18.27■□□□□ 0.51
SREBF1-201ENST00000261646 JAKMIP2Q96AA8 810 aa18.27■□□□□ 0.51
SREBF1-201ENST00000261646 SAR1BQ9Y6B6 198 aa18.27■□□□□ 0.51
SREBF1-201ENST00000261646 RPAP1Q9BWH6 1393 aaPredicted RBP18.27■□□□□ 0.51
SREBF1-201ENST00000261646 A1BGP04217 495 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 SLC5A1P13866 664 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 IKQ13123 557 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-201ENST00000261646 NAA25Q14CX7 972 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 SEPT7Q16181 437 aaKnown RBP18.26■□□□□ 0.51
SREBF1-201ENST00000261646 SLC35F6Q8N357 371 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 MED4Q9NPJ6 270 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 CAPN7Q9Y6W3 813 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 MCM7P33993 719 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 RNASE9P60153 205 aaKnown RBP18.26■□□□□ 0.51
SREBF1-201ENST00000261646 ASIC1P78348 528 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 GCKRQ14397 625 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 CC2D1AQ6P1N0 951 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-201ENST00000261646 SLC4A4Q9Y6R1 1079 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-201ENST00000261646 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-201ENST00000261646 STARD3NLO95772 234 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 GNGT1P63211 74 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 AMPD3Q01432 767 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 DSCC1Q9BVC3 393 aa18.26■□□□□ 0.51
SREBF1-201ENST00000261646 IKBKBO14920 756 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 GPAA1O43292 621 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 PPFIA1Q13136 1202 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 C8orf74Q6P047 294 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms