RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 NBPF20Q3BBV1 942 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 RGS22Q8NE09 1264 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 BRF1Q92994 677 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 MOV10L1Q9BXT6 1211 aaKnown RBP9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 SATB2Q9UPW6 733 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 CD109Q6YHK3 1445 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 APOBRQ0VD83 1088 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 NUTM2GQ5VZR2 741 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 SUGP1Q8IWZ8 645 aaKnown RBP9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 CCDC170Q8IYT3 715 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 TRIM58Q8NG06 486 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 CENPKQ9BS16 269 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 IL1RAPL2Q9NP60 686 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 HOMER3Q9NSC5 361 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 RNF14Q9UBS8 474 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 USP16Q9Y5T5 823 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 GOLGA8BA8MQT2 603 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 PLCB4Q15147 1175 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 SOGA3Q5TF21 947 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 GGT6Q6P531 493 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 VSIG1Q86XK7 387 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 WHAMMQ8TF30 809 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 MIS12Q9H081 205 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 CFAP73A6NFT4 308 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 PDE6BP35913 854 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 RASIP1Q5U651 963 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 TMEM132EQ6IEE7 984 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 SMC1BQ8NDV3 1235 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 VIPAS39Q9H9C1 493 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 KLHL14Q9P2G3 628 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 ITGB1BP2Q9UKP3 347 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 MTUS1Q9ULD2 1270 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 IKBKBO14920 756 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 ZFXP17010 805 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 TCP1P17987 556 aaKnown RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 ZNF131P52739 623 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 CCDC62Q6P9F0 684 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 TRIML1Q8N9V2 468 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 UBLCP1Q8WVY7 318 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 MCUR1Q96AQ8 359 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 RNF41Q9H4P4 317 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 UTP11Q9Y3A2 253 aaKnown RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 IKBKGQ9Y6K9 419 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 SLFN14P0C7P3 912 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 IARSP41252 1262 aaKnown RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 RRAGBQ5VZM2 374 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 CC2D1AQ6P1N0 951 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 IFT81Q8WYA0 676 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 LZICQ8WZA0 190 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 NOX5Q96PH1 765 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 CAPZA3Q96KX2 299 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 SPAG5Q96R06 1193 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 RNF216Q9NWF9 866 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 FAM169AQ9Y6X4 670 aa9.32□□□□□ -0.92
SNCAIP-201ENST00000261367 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 ATP8B2P98198 1209 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 CAPRIN2Q6IMN6 1127 aaKnown RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 SBNO2Q9Y2G9 1366 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 REREQ9P2R6 1566 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 HPDP32754 393 aaPredicted RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 NOP2P46087 812 aaKnown RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 CORO7P57737 925 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 CETN1Q12798 172 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 CUL4AQ13619 759 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 IQCGQ9H095 443 aaKnown RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 RBM8AQ9Y5S9 174 aaKnown RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 ZC3H6P61129 1189 aaKnown RBP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 TMEM266Q2M3C6 531 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 ATP5HO75947 161 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 SUN1O94901 812 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 CALCOCO2Q13137 446 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 TMTC2Q8N394 836 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 PARD6BQ9BYG5 372 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 RAB17Q9H0T7 212 aa9.31□□□□□ -0.92
SNCAIP-201ENST00000261367 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 CUTAO60888 179 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 NME8Q8N427 588 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 NCOA7Q8NI08 942 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 BICC1Q9H694 974 aaKnown RBP9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 STRN4Q9NRL3 753 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 IRAK4Q9NWZ3 460 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 FAF1Q9UNN5 650 aaPredicted RBP9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 NEO1Q92859 1461 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 CLTCQ00610 1675 aaKnown RBP9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 PIK3R4Q99570 1358 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 GOLGA8AA7E2F4 631 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 OLFM3Q96PB7 478 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 XPO4Q9C0E2 1151 aaKnown RBP9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 SLC12A5Q9H2X9 1139 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms