RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FNBP1Q96RU3 617 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 BAG1Q99933 345 aaPredicted RBP13.58□□□□□ -0.24
COL8A1-201ENST00000261037 TXNDC16Q9P2K2 825 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
COL8A1-201ENST00000261037 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
COL8A1-201ENST00000261037 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
COL8A1-201ENST00000261037 USH1GQ495M9 461 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 ANKS4BQ8N8V4 417 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 MSANTD4Q8NCY6 345 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 RAD50Q92878 1312 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 SEC62Q99442 399 aaKnown RBP13.57□□□□□ -0.24
COL8A1-201ENST00000261037 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
COL8A1-201ENST00000261037 YTHDC2Q9H6S0 1430 aaKnown RBP13.57□□□□□ -0.24
COL8A1-201ENST00000261037 PUM3Q15397 648 aaKnown RBP13.57□□□□□ -0.24
COL8A1-201ENST00000261037 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 SMC6Q96SB8 1091 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 PZPP20742 1482 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 CFAP58Q5T655 872 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 TIGD1Q96MW7 591 aa13.57□□□□□ -0.24
COL8A1-201ENST00000261037 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 MYL5Q02045 173 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 MAP7D1Q3KQU3 841 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 PICK1Q9NRD5 415 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 SNX14Q9Y5W7 946 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 ATP10AO60312 1499 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 SPATA24Q86W54 205 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 IP6K1Q92551 441 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 RNF34Q969K3 372 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 EYA2O00167 538 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 IGSF3O75054 1194 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 TNFAIP3P21580 790 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
COL8A1-201ENST00000261037 RAD51AP2Q09MP3 1159 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 TCP10Q12799 353 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 CPLX4Q7Z7G2 160 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 IGSF22Q8N9C0 903 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 GINS2Q9Y248 185 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 ZFYVE9O95405 1425 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 DEXIO95424 95 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 TNNC1P63316 161 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 CFAP157Q5JU67 520 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 METTL22Q9BUU2 404 aaPredicted RBP13.56□□□□□ -0.24
COL8A1-201ENST00000261037 TMOD4Q9NZQ9 345 aa13.56□□□□□ -0.24
COL8A1-201ENST00000261037 SPOPO43791 374 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
COL8A1-201ENST00000261037 GTF3C6Q969F1 213 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
COL8A1-201ENST00000261037 ODF2LQ9ULJ1 636 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 ATP2A2P16615 1042 aaKnown RBP13.55□□□□□ -0.24
COL8A1-201ENST00000261037 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 PHKBQ93100 1093 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 GGA1Q9UJY5 639 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 ZBTB7BO15156 539 aaPredicted RBP13.55□□□□□ -0.24
COL8A1-201ENST00000261037 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
COL8A1-201ENST00000261037 GPAA1O43292 621 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 ASIC2Q16515 512 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 ANO1Q5XXA6 986 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 TTC14Q96N46 770 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 SYNRGQ9UMZ2 1314 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 IVLP07476 585 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 KCNA6P17658 529 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 CNGA4Q8IV77 575 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 SUCLG2Q96I99 432 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 CALCOCO2Q13137 446 aa13.55□□□□□ -0.24
COL8A1-201ENST00000261037 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
COL8A1-201ENST00000261037 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL8A1-201ENST00000261037 A1BGP04217 495 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-201ENST00000261037 HPDP32754 393 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-201ENST00000261037 PLCD1P51178 756 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 NBPF11Q86T75 865 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 KIFC2Q96AC6 838 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 MTUS1Q9ULD2 1270 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 TBC1D8BQ0IIM8 1120 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 UTP14CQ5TAP6 766 aaKnown RBP13.54□□□□□ -0.24
COL8A1-201ENST00000261037 NBPF14Q5TI25 921 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 E7EVH7 732 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 CALUO43852 315 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-201ENST00000261037 SH3BP5O60239 455 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 CLCN1P35523 988 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 CEP57Q86XR8 500 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
COL8A1-201ENST00000261037 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 VAV2P52735 878 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 TPD52P55327 224 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-201ENST00000261037 BEND3Q5T5X7 828 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 KIFAP3Q92845 792 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
COL8A1-201ENST00000261037 USP19O94966 1318 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms