RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 NSUN4Q96CB9 384 aaKnown RBP20.82■□□□□ 0.92
CGREF1-201ENST00000260595 GPR108Q9NPR9 543 aa20.82■□□□□ 0.92
CGREF1-201ENST00000260595 MYH2Q9UKX2 1941 aa20.82■□□□□ 0.92
CGREF1-201ENST00000260595 SLURP2P0DP57 97 aa20.81■□□□□ 0.92
CGREF1-201ENST00000260595 C1orf115Q9H7X2 142 aa20.81■□□□□ 0.92
CGREF1-201ENST00000260595 HTTP42858 3142 aa20.81■□□□□ 0.92
CGREF1-201ENST00000260595 TNRC18O15417 2968 aaPredicted RBP20.81■□□□□ 0.92
CGREF1-201ENST00000260595 ZBED9Q6R2W3 1325 aa20.8■□□□□ 0.92
CGREF1-201ENST00000260595 UQCRFS1P1P0C7P4 283 aa20.8■□□□□ 0.92
CGREF1-201ENST00000260595 TNNI3KQ59H18 835 aa20.8■□□□□ 0.92
CGREF1-201ENST00000260595 ANKRD23Q86SG2 305 aa20.8■□□□□ 0.92
CGREF1-201ENST00000260595 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
CGREF1-201ENST00000260595 NOP58Q9Y2X3 529 aaKnown RBP20.8■□□□□ 0.92
CGREF1-201ENST00000260595 FPGT-TNNI3KV9GXZ4 949 aa20.8■□□□□ 0.92
CGREF1-201ENST00000260595 NPM3O75607 178 aaKnown RBP20.79■□□□□ 0.92
CGREF1-201ENST00000260595 PICALMQ13492 652 aa20.79■□□□□ 0.92
CGREF1-201ENST00000260595 ITPRIPQ8IWB1 547 aa20.79■□□□□ 0.92
CGREF1-201ENST00000260595 ARMC5Q96C12 935 aa20.79■□□□□ 0.92
CGREF1-201ENST00000260595 CXCL11O14625 94 aa20.78■□□□□ 0.92
CGREF1-201ENST00000260595 SURF6O75683 361 aaKnown RBP20.78■□□□□ 0.92
CGREF1-201ENST00000260595 LDHCP07864 332 aa20.78■□□□□ 0.92
CGREF1-201ENST00000260595 GSTO1P78417 241 aa20.78■□□□□ 0.92
CGREF1-201ENST00000260595 C17orf99Q6UX52 265 aa20.78■□□□□ 0.92
CGREF1-201ENST00000260595 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
CGREF1-201ENST00000260595 SCYL3Q8IZE3 742 aa20.78■□□□□ 0.92
CGREF1-201ENST00000260595 DBNDD2Q9BQY9 259 aa20.78■□□□□ 0.92
CGREF1-201ENST00000260595 ARHGAP39Q9C0H5 1083 aa20.78■□□□□ 0.92
CGREF1-201ENST00000260595 PDHXO00330 501 aa20.77■□□□□ 0.92
CGREF1-201ENST00000260595 MAP4K4O95819 1239 aaPredicted RBP20.77■□□□□ 0.92
CGREF1-201ENST00000260595 PTPRAP18433 802 aa20.77■□□□□ 0.92
CGREF1-201ENST00000260595 LACTBP83111 547 aaPredicted RBP20.77■□□□□ 0.92
CGREF1-201ENST00000260595 ARHGEF6Q15052 776 aa20.77■□□□□ 0.92
CGREF1-201ENST00000260595 GPAT2Q6NUI2 795 aa20.77■□□□□ 0.92
CGREF1-201ENST00000260595 RAI14Q9P0K7 980 aa20.77■□□□□ 0.92
CGREF1-201ENST00000260595 ADGRA2Q96PE1 1338 aa20.77■□□□□ 0.91
CGREF1-201ENST00000260595 POTEFA5A3E0 1075 aa20.76■□□□□ 0.91
CGREF1-201ENST00000260595 SNRKQ9NRH2 765 aa20.76■□□□□ 0.91
CGREF1-201ENST00000260595 LRP2BPQ9P2M1 347 aa20.76■□□□□ 0.91
CGREF1-201ENST00000260595 PTCH2Q9Y6C5 1203 aa20.76■□□□□ 0.91
CGREF1-201ENST00000260595 ZHX2Q9Y6X8 837 aa20.76■□□□□ 0.91
CGREF1-201ENST00000260595 AK9Q5TCS8 1911 aa20.75■□□□□ 0.91
CGREF1-201ENST00000260595 TBC1D12O60347 775 aa20.75■□□□□ 0.91
CGREF1-201ENST00000260595 CTNND1O60716 968 aaKnown RBP20.75■□□□□ 0.91
CGREF1-201ENST00000260595 OS9Q13438 667 aaPredicted RBP20.75■□□□□ 0.91
CGREF1-201ENST00000260595 ZNF512BQ96KM6 892 aaPredicted RBP20.75■□□□□ 0.91
CGREF1-201ENST00000260595 CPA4Q9UI42 421 aa20.75■□□□□ 0.91
CGREF1-201ENST00000260595 AFG3L2Q9Y4W6 797 aa20.75■□□□□ 0.91
CGREF1-201ENST00000260595 DOCK2Q92608 1830 aa20.74■□□□□ 0.91
CGREF1-201ENST00000260595 A0A0G2JLL6 359 aaPredicted RBP20.74■□□□□ 0.91
CGREF1-201ENST00000260595 CYP2E1P05181 493 aaPredicted RBP20.74■□□□□ 0.91
CGREF1-201ENST00000260595 CTGFP29279 349 aa20.74■□□□□ 0.91
CGREF1-201ENST00000260595 CCDC158Q5M9N0 1113 aa20.74■□□□□ 0.91
CGREF1-201ENST00000260595 TTC39AQ5SRH9 613 aa20.74■□□□□ 0.91
CGREF1-201ENST00000260595 PRRT2Q7Z6L0 340 aaPredicted RBP20.74■□□□□ 0.91
CGREF1-201ENST00000260595 PICK1Q9NRD5 415 aa20.74■□□□□ 0.91
CGREF1-201ENST00000260595 KIF22Q14807 665 aa20.73■□□□□ 0.91
CGREF1-201ENST00000260595 CEP85Q6P2H3 762 aa20.73■□□□□ 0.91
CGREF1-201ENST00000260595 PANK1Q8TE04 598 aa20.73■□□□□ 0.91
CGREF1-201ENST00000260595 EAF2Q96CJ1 260 aaPredicted RBP20.73■□□□□ 0.91
CGREF1-201ENST00000260595 ZNF333Q96JL9 665 aa20.73■□□□□ 0.91
CGREF1-201ENST00000260595 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
CGREF1-201ENST00000260595 DBNLQ9UJU6 430 aaKnown RBP20.73■□□□□ 0.91
CGREF1-201ENST00000260595 SH3RF3Q8TEJ3 882 aaPredicted RBP20.72■□□□□ 0.91
CGREF1-201ENST00000260595 TLR7Q9NYK1 1049 aaKnown RBP20.72■□□□□ 0.91
CGREF1-201ENST00000260595 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.72■□□□□ 0.91
CGREF1-201ENST00000260595 COL2A1P02458 1487 aaPredicted RBP20.72■□□□□ 0.91
CGREF1-201ENST00000260595 FAM196BA6NMK8 535 aa20.71■□□□□ 0.91
CGREF1-201ENST00000260595 GNRH1P01148 92 aa20.71■□□□□ 0.91
CGREF1-201ENST00000260595 ZAP70P43403 619 aa20.71■□□□□ 0.91
CGREF1-201ENST00000260595 PPP4CP60510 307 aa20.71■□□□□ 0.91
CGREF1-201ENST00000260595 NAA16Q6N069 864 aaPredicted RBP20.71■□□□□ 0.91
CGREF1-201ENST00000260595 FASTKD5Q7L8L6 764 aaKnown RBP20.71■□□□□ 0.91
CGREF1-201ENST00000260595 ADGRA1Q86SQ6 560 aa20.71■□□□□ 0.91
CGREF1-201ENST00000260595 TEX11Q8IYF3 940 aa20.71■□□□□ 0.91
CGREF1-201ENST00000260595 CCDC8Q9H0W5 538 aaPredicted RBP20.71■□□□□ 0.91
CGREF1-201ENST00000260595 ZSWIM8A7E2V4 1837 aa20.71■□□□□ 0.91
CGREF1-201ENST00000260595 CYP2C8P10632 490 aa20.7■□□□□ 0.9
CGREF1-201ENST00000260595 BCRP11274 1271 aa20.7■□□□□ 0.9
CGREF1-201ENST00000260595 SLC9C1Q4G0N8 1177 aa20.7■□□□□ 0.9
CGREF1-201ENST00000260595 CCDC84Q86UT8 332 aaPredicted RBP20.7■□□□□ 0.9
CGREF1-201ENST00000260595 TRIM47Q96LD4 638 aa20.7■□□□□ 0.9
CGREF1-201ENST00000260595 PARK7Q99497 189 aaKnown RBP20.7■□□□□ 0.9
CGREF1-201ENST00000260595 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.7■□□□□ 0.9
CGREF1-201ENST00000260595 PIH1D3Q9NQM4 214 aaKnown RBP20.7■□□□□ 0.9
CGREF1-201ENST00000260595 IGSF3O75054 1194 aa20.69■□□□□ 0.9
CGREF1-201ENST00000260595 EN2P19622 333 aaPredicted RBP20.69■□□□□ 0.9
CGREF1-201ENST00000260595 PSMC4P43686 418 aa20.69■□□□□ 0.9
CGREF1-201ENST00000260595 PRMT2P55345 433 aa20.69■□□□□ 0.9
CGREF1-201ENST00000260595 RRP1BQ14684 758 aaKnown RBP20.69■□□□□ 0.9
CGREF1-201ENST00000260595 NBPF11Q86T75 865 aa20.69■□□□□ 0.9
CGREF1-201ENST00000260595 AATFQ9NY61 560 aaKnown RBP eCLIP20.69■□□□□ 0.9
CGREF1-201ENST00000260595 SLC45A1Q9Y2W3 748 aa20.69■□□□□ 0.9
CGREF1-201ENST00000260595 ECM2O94769 699 aaPredicted RBP20.68■□□□□ 0.9
CGREF1-201ENST00000260595 BAG3O95817 575 aa20.68■□□□□ 0.9
CGREF1-201ENST00000260595 PRPF38BQ5VTL8 546 aaKnown RBP20.68■□□□□ 0.9
CGREF1-201ENST00000260595 SRRDQ9UH36 339 aa20.68■□□□□ 0.9
CGREF1-201ENST00000260595 CENPFP49454 3210 aa20.68■□□□□ 0.9
CGREF1-201ENST00000260595 TRIM75PA6NK02 468 aa20.67■□□□□ 0.9
CGREF1-201ENST00000260595 OSBPP22059 807 aa20.67■□□□□ 0.9
CGREF1-201ENST00000260595 CAP2P40123 477 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms